| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2633 |
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| Symbol | aspS |
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| ID | 5713531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2788656 |
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| End bp | 2790428 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268557 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001533967 |
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| Protein GI | 159045173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.530132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0940983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT TTCGCACCCA TACTTGCGCC GAGCTGACCA AGGACGCCGT TGGCCAGACG
GTCCGGCTGT CGGGCTGGGT CCACCGGGTG CGGGATCATG GCGGCGTGCT CTTCATCGAC
CTGCGCGACC ATTACGGCAT GACCCAGGTG CTGTGCGATC CCGACAGCCC GGTCTTCTCG
CAGGTCGAGA AGGTCCGCTC CGAATGGTGC ATCCGCATCG ACGGCACCGT GAAGGCCCGC
GACGAGAGCC TGATCAACCC CAAGATCCCC ACCGGCGAGA TCGAGGTCTT CATCCGCGAC
ATGGAGGTGC TGGGCACCGC CGAGGAACTG CCCCTGCCGG TCTTCGGCGA CCAGGAATAC
CCCGAGGAAA CCCGGCTGAA ATACCGCTTC CTCGACCTGC GCCGCGAGAG CCTGCATGAC
AACATCATGC TGCGCTCCAA GGTGGTGCAA TCCATCCGCA AGCGCATGTG GGACATCGAC
TTCACCGAGT TCCAGACCCC GATCATCACG GCCTCCTCGC CCGAAGGTGC CCGCGACTTC
CTCGTGCCGT CTCGCCTGCA TCCGGGCAAG TTCTATGCGC TGCCCCAGGC CCCGCAGCAA
TTCAAGCAGC TGATCATGGT CGGCGGCTTC GACAAGTACT TCCAGATCGC GCCGTGCTTC
CGCGACGAGG ACCCGCGCGC CGACCGCTCG CCCACCGACT TCTACCAGCT TGACCTTGAG
ATGAGCTTCG TCAGCCAGCA GGACGTGTTC GACACGATCC AGCCGGTGAT CGCCGGCATC
TTCGAGGAAT TCGGCGGCGG CCGGCGGGTC GACACCGACT GGCCGCTGAT TTCCTATCGC
GACAGCGCGC TGTGGTACGG TACCGACAAG CCCGATCTGC GCAACCCGAT CAAGATGCAG
ATCGTCTCAG ACCACTTCGC GGGCTCCGGC TTTGCCATCT TCGCCAAGCT GCTCGAACAG
GAGGGTACCG AGATCCGCGC CATCCCCGCC CCCGGCGGCG GCTCGCGCAA GTTCTGCGAC
CGGATGAACA AGTTCGCCCA GGAACAGGGC CTGCCCGGGA TGGGGTATAT TTTCTGGCGC
GACCAGGGCC AGGGGATGGA AGCCGCGGGC CCGCTCGCCA AGAACATCGG CCCCGAGCGG
ACCGAGGCGA TCCGCCAGCA ACTGGGACTG CAAGTGGGCG ATGCCGCGTT CTTCCTCGGC
GGCAAGCCCG CCAGCTTCGA GGCGGTGGCG GGCCGCGCCC GCACGGTGAT CGGCGAGGAG
CTGGGCCTGA TCGATCAGGA CCGCTTCGCC TTCGCCTGGA TCGTCGATTT CCCGATGTAC
GAGAAGGATG ACGAGGGGCG GATCGACTTC TCCCACAACC CGTTCTCCAT GCCCCAGGGC
GGGATGGCGG CGCTGGAGGG CGACCCGCTG GAGGTGCTGG GCTACCAGTA CGACCTGGCG
TGCAACGGCT ACGAGCTGGT CTCGGGTGCC ATCCGGAACC ACAAGCTCGA CATCATGTAC
AAGGCGTTCG AGATCGCGGG CTACGGCGCC GATGAGGTCG AGAAACGCTT CGGCGGCATG
GTCAATGCGT TCAAATACGG CCCGCCCCCC CATGGCGGAT GTGCAGCGGG GATCGACCGG
ATCGTGATGC TGTTGGCGGA TACGGCGAAT ATCCGCGAGG TCATCATGTT CCCGATGAAC
CAGCGCGCCG AGGACCTGAT GATGAACGCG CCCTCCGAGC CGACGGGGGA GCAGTTGCGC
GACCTGTCCC TCCGCGTGAT CCCGCAGGAA TAA
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| Protein sequence | MHAFRTHTCA ELTKDAVGQT VRLSGWVHRV RDHGGVLFID LRDHYGMTQV LCDPDSPVFS
QVEKVRSEWC IRIDGTVKAR DESLINPKIP TGEIEVFIRD MEVLGTAEEL PLPVFGDQEY
PEETRLKYRF LDLRRESLHD NIMLRSKVVQ SIRKRMWDID FTEFQTPIIT ASSPEGARDF
LVPSRLHPGK FYALPQAPQQ FKQLIMVGGF DKYFQIAPCF RDEDPRADRS PTDFYQLDLE
MSFVSQQDVF DTIQPVIAGI FEEFGGGRRV DTDWPLISYR DSALWYGTDK PDLRNPIKMQ
IVSDHFAGSG FAIFAKLLEQ EGTEIRAIPA PGGGSRKFCD RMNKFAQEQG LPGMGYIFWR
DQGQGMEAAG PLAKNIGPER TEAIRQQLGL QVGDAAFFLG GKPASFEAVA GRARTVIGEE
LGLIDQDRFA FAWIVDFPMY EKDDEGRIDF SHNPFSMPQG GMAALEGDPL EVLGYQYDLA
CNGYELVSGA IRNHKLDIMY KAFEIAGYGA DEVEKRFGGM VNAFKYGPPP HGGCAAGIDR
IVMLLADTAN IREVIMFPMN QRAEDLMMNA PSEPTGEQLR DLSLRVIPQE
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