| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2626 |
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| Symbol | |
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| ID | 5713524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2784148 |
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| End bp | 2785326 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268550 |
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| Product | putative major facilitator superfamily (MFS) transporter |
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| Protein accession | YP_001533960 |
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| Protein GI | 159045166 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.686935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0081174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCTTG CCCTTCACGC CGTTCTGGCG CTGTTTTTCC TCAACGGAGC TTTGTTCGGC
AGCTGGACCG CGCGGATCCC GGCCTTCAAG GCGCGCTTCG CGCTGGATGC GGACGGGTTG
GGTCTGGTGC TGTTGTGTCT GGCGGCGGGC GCGATCGCCG GTTTTCCGCT GGCGGGCCGG
GTGATCGACC GCCACGGTCC CGCCGGGCTG AGCAAGCTCT TGGCACTTCT CTATCTTTTT
TCCCTACCGC TGGTCGCGAT GGCGCCCAAT GTCTGGCTGC TGGCGCTGGC GCTGGCGGCC
TTTGGGGTCT GCTTCGGCGG GATGGACGTG GCGATGAACG CCTGGGGCGC GGAGGTGGAG
ACCGCCCATG GCCGCCCGAT CCTGCCGCAG CTCCATGCGC TGTTCAGCCT TGGCGCGGGT
CTTGGCGCAG GGGCCGGTGC GGGCGCGGTG GCCGCGGGGC TCGACCCGCT GGCCCATTTC
GCCTGGGTTT CCGGGGCGCT GGCGCTGGCG GGCTTGCCGG TGATCCTGCG TCCGGGCGCC
CGGGCGGCGA CACCGCCCGC CCGTCCCGCG GGTCCCGCCG CCAAGGGCGC CCTGCTGCCC
AAGGGCGCGT TGCTGCCGGT CGGGCTGGTC GCCGGGGCGA CGGGGCTGAG CGAGGGGGCC
ATCGCCGATT GGAGCGCGGT GTATCTGAGC ATTGTCACCG AAGCCCCGCC GCAGATCGCG
GCGTTGGGGT TTGCCGCCTT TTCGGTGACC ATGGTGGTCG TGCGGCTGAG CGGCGGCTGG
CTGGTCACCC GGCTGGGCGT GGTGCGCGCG GTGAGGATCT CGGGCCTGTG CCTGGCCATC
GGGGCGGGTT TGGCGGTGCT CGGCGCCTCG GCGGCAAGCG TGCTGGCCGG GTTTGCGATC
CTGGGCTGCG GGGCGGCGCT GCTGATGCCG CTGGCCTTTG CGCGGTCGGC ACGCGACGAC
AAGGTGGCGC CCGGCGCGGG GATCGCGCAG GTGGCTCTGC TGGCCTATGG CGGGGTGTTG
TTGGGCCCGC CGCTGATCGG GTTTGTCGCT GCGCGCGCCG GGTACCCGGC GAGCTTTGCC
CTGCTCGCGG CACTCGGGTT GATGGTGGTG GTGTTGGCGC GGGCCTTGCA GCCCCCCCTT
GAAGCCCGCG GCGAAAACCC CGAGGTATCG GGGCAGTGA
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| Protein sequence | MRLALHAVLA LFFLNGALFG SWTARIPAFK ARFALDADGL GLVLLCLAAG AIAGFPLAGR
VIDRHGPAGL SKLLALLYLF SLPLVAMAPN VWLLALALAA FGVCFGGMDV AMNAWGAEVE
TAHGRPILPQ LHALFSLGAG LGAGAGAGAV AAGLDPLAHF AWVSGALALA GLPVILRPGA
RAATPPARPA GPAAKGALLP KGALLPVGLV AGATGLSEGA IADWSAVYLS IVTEAPPQIA
ALGFAAFSVT MVVVRLSGGW LVTRLGVVRA VRISGLCLAI GAGLAVLGAS AASVLAGFAI
LGCGAALLMP LAFARSARDD KVAPGAGIAQ VALLAYGGVL LGPPLIGFVA ARAGYPASFA
LLAALGLMVV VLARALQPPL EARGENPEVS GQ
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