Gene Dshi_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2616 
Symbol 
ID5713514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2777782 
End bp2778405 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID641268540 
Productputative gcrA cell cycle regulator 
Protein accessionYP_001533950 
Protein GI159045156 
COG category[S] Function unknown 
COG ID[COG5352] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.374735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00797611 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTGGA CTGACGAGCG CGTTGAAATT CTCAAGACCA TGTGGGGCGA AGGAAAGAGC 
GCCAGTCAGA TCGCCAAGGA ACTGGGCGGC GTGACCCGCA ACGCGGTGAT CGGCAAGGTC
CACCGGCTGG GCCTGTCGAA CCGCAATGGC GGCGGCGGCA GTACCGCGGC CAAGGCGGCC
GAGCCGGCCA AGAAGGACAG CGCACAGGCC GCGGCGAAAC CGGCGAAGGC GGCGGAGAAG
CCGCGGCCCG CCCCGGAGCC TGCCAACACC CCCAAGACCG ACGCCGCGCG CCCGGCCGAA
GCGGCCCCCG CCGCGGCCAG CGCGCCGGAG CCCACGCCCC TGCGCCGCAC CATCGTGCCC
GCGGGCCAGC CCCTGCCGCC GCAACCCTCG GCCAACGAGA TCAGCCCCGA GGCGCTGGCC
TCGGTGCGCG AGGTGGAAAA GAAGGCCAAG AAGCTGAGCC TGATGGAGCT GACCGAGCGG
ACCTGCAAAT GGCCCATCGG CGATCCGGCC ACGGAAGAAT TCTGGTTCTG CGGCCTGCCG
GTGCAGGCGG GCAAGCCCTA CTGCGAGGCC CATGTGGGCG TGGCGTTCCA ACCCATGTCC
TCGCGCCGCG ACCGGCGGCG CTAA
 
Protein sequence
MSWTDERVEI LKTMWGEGKS ASQIAKELGG VTRNAVIGKV HRLGLSNRNG GGGSTAAKAA 
EPAKKDSAQA AAKPAKAAEK PRPAPEPANT PKTDAARPAE AAPAAASAPE PTPLRRTIVP
AGQPLPPQPS ANEISPEALA SVREVEKKAK KLSLMELTER TCKWPIGDPA TEEFWFCGLP
VQAGKPYCEA HVGVAFQPMS SRRDRRR