Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2616 |
Symbol | |
ID | 5713514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2777782 |
End bp | 2778405 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641268540 |
Product | putative gcrA cell cycle regulator |
Protein accession | YP_001533950 |
Protein GI | 159045156 |
COG category | [S] Function unknown |
COG ID | [COG5352] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.374735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00797611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCTGGA CTGACGAGCG CGTTGAAATT CTCAAGACCA TGTGGGGCGA AGGAAAGAGC GCCAGTCAGA TCGCCAAGGA ACTGGGCGGC GTGACCCGCA ACGCGGTGAT CGGCAAGGTC CACCGGCTGG GCCTGTCGAA CCGCAATGGC GGCGGCGGCA GTACCGCGGC CAAGGCGGCC GAGCCGGCCA AGAAGGACAG CGCACAGGCC GCGGCGAAAC CGGCGAAGGC GGCGGAGAAG CCGCGGCCCG CCCCGGAGCC TGCCAACACC CCCAAGACCG ACGCCGCGCG CCCGGCCGAA GCGGCCCCCG CCGCGGCCAG CGCGCCGGAG CCCACGCCCC TGCGCCGCAC CATCGTGCCC GCGGGCCAGC CCCTGCCGCC GCAACCCTCG GCCAACGAGA TCAGCCCCGA GGCGCTGGCC TCGGTGCGCG AGGTGGAAAA GAAGGCCAAG AAGCTGAGCC TGATGGAGCT GACCGAGCGG ACCTGCAAAT GGCCCATCGG CGATCCGGCC ACGGAAGAAT TCTGGTTCTG CGGCCTGCCG GTGCAGGCGG GCAAGCCCTA CTGCGAGGCC CATGTGGGCG TGGCGTTCCA ACCCATGTCC TCGCGCCGCG ACCGGCGGCG CTAA
|
Protein sequence | MSWTDERVEI LKTMWGEGKS ASQIAKELGG VTRNAVIGKV HRLGLSNRNG GGGSTAAKAA EPAKKDSAQA AAKPAKAAEK PRPAPEPANT PKTDAARPAE AAPAAASAPE PTPLRRTIVP AGQPLPPQPS ANEISPEALA SVREVEKKAK KLSLMELTER TCKWPIGDPA TEEFWFCGLP VQAGKPYCEA HVGVAFQPMS SRRDRRR
|
| |