| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2615 |
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| Symbol | |
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| ID | 5713513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2776824 |
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| End bp | 2777627 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268539 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001533949 |
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| Protein GI | 159045155 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.747872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00151672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGATC AAACCCGCAT GGGCACCCGC AGGTTCGGGC GCATCAACTG GCTCGGCGTG
GCCACCCTGG CCGAACGGGA GATGCGCCGC TTTCTCGCGG TCTGGACCCA GACCGTGGCC
GGCCCCCTGG TCACGGCGGG GCTGTTCATC CTGATCTTCA ACCTCGCCAT CGGACCCCGG
CGGGGCGAGG TGATGGGCGT GCCCTTCATC GAATTCCTCA TCCCCGGCAT CCTGATGATG
ACCGTAATCC AGAACGCCTT CGCCAACACC TCCAGTTCGA TCATGGTGGC CAAGGTGCAG
GGCAATATCG TCGATACTCT GATGCCACCC CTGTCGGCGG CCGAACTGGT GGCGGGCTAC
ATCATCGGCG GGATCGGACG CGGGCTGCTG GTGGGCCTGG CGATCGTTGC GGCCACCATG
TTGCTTCTGG GGACATCGGT CGCCCATCCG CTCTGGGTGC TTGTCTTCAT CCTGCTGGGG
GCGGCGGTGC TGAGCGGGCT CGGCATCATC GCCGCGATCT ACGCCAACAA GTTCGACCAG
ATGGCCGCGA TCACCAATTT CGTCATCACG CCCCTGAGCT TCCTGTCCGG CACCTTCTAC
TCGCTCGAAG CCCTGCCGCC CCTGATGCAG ACCCTCAGCC ATATCAACCC GATGTTCTAC
ATGATCGACG GGGTGCGCTA CGGCATGCTC GGCACCTCCG ACAGCTCGCC CTGGCTGGGG
CTCGCGGTCT GCGCCGCCTC CGCGGTCGCG ATCCTGCTGG TCTGCTGGGC CTTCTTCCGC
TCCGGATATC GGCTGAAGCC CTGA
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| Protein sequence | MTDQTRMGTR RFGRINWLGV ATLAEREMRR FLAVWTQTVA GPLVTAGLFI LIFNLAIGPR
RGEVMGVPFI EFLIPGILMM TVIQNAFANT SSSIMVAKVQ GNIVDTLMPP LSAAELVAGY
IIGGIGRGLL VGLAIVAATM LLLGTSVAHP LWVLVFILLG AAVLSGLGII AAIYANKFDQ
MAAITNFVIT PLSFLSGTFY SLEALPPLMQ TLSHINPMFY MIDGVRYGML GTSDSSPWLG
LAVCAASAVA ILLVCWAFFR SGYRLKP
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