| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2604 |
|---|
| Symbol | |
|---|
| ID | 5713502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2769916 |
|---|
| End bp | 2770317 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641268528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533938 |
|---|
| Protein GI | 159045144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00462072 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAACC TCAGCCTGGC CATGCGGTCG GCCCTGTCGA ACTACGCCAC CTTTTCGGGA
CGCGCGGCGC GTCCGGCCTA TTGGTGGTGG GTGTTGTCGG TTTTTCTGTT GCTGTTCGTG
CTGGGGCTGC TGGATGCGTT CGTGATGGCA CCCCTGCTCG GGGCGGGCAT CGCGGATGAG
AACGCCGGGC AGCCGCTGTC CTTCCTGGCC AGCCTCGCCC TGCTTTTGCC GAACATCTCC
ATCGGGGTAC GGCGACTGCA CGATACCGGG CGGACCGGGT GGTGGATGCT GCTCGCGCTC
ATCCCGGTGC TCGGGGTACT GGTGCTGATC TACTTCTACC TCCAGCCGAG CGAGGAAGGC
GAAAACGCCC ACGGCCCGCA GCCGGTCTGG CCCCCGGCCT GA
|
|---|
| Protein sequence | MENLSLAMRS ALSNYATFSG RAARPAYWWW VLSVFLLLFV LGLLDAFVMA PLLGAGIADE
NAGQPLSFLA SLALLLPNIS IGVRRLHDTG RTGWWMLLAL IPVLGVLVLI YFYLQPSEEG
ENAHGPQPVW PPA
|
|---|
| |