| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2583 |
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| Symbol | rpmB |
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| ID | 5713481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2749939 |
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| End bp | 2750226 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268507 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_001533917 |
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| Protein GI | 159045123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.273266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000206552 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCGCC GCTGCGAACT GACCGGAAAA GGCGTCCAGG TGGGCAATAA TGTCAGCCAC
GCCAACAACA AGACCAAGCG GCGCTTCCTG CCGAACCTGA ACGACGTGAC TCTGATGTCC
GAAACCCTGG GCCGGGGCTT CAAGCTGCGG ATCTCTGCGG CGGCGCTGCG GACCGTGGAT
CACCGCGGCG GACTCGACAG CTTCCTTGCG AAGGCCAAGG ATGCAGAGCT GTCCGAAAAG
GCGCTGAAGA TCAAGAAAGA CATCGCAAAG GCCCAGGCCG CCGCCTGA
|
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| Protein sequence | MSRRCELTGK GVQVGNNVSH ANNKTKRRFL PNLNDVTLMS ETLGRGFKLR ISAAALRTVD
HRGGLDSFLA KAKDAELSEK ALKIKKDIAK AQAAA
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