| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2578 |
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| Symbol | hisA |
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| ID | 5713476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2743867 |
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| End bp | 2744589 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268502 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001533912 |
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| Protein GI | 159045118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.372932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000553331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCTTT ATCCCGCCAT CGATCTGAAA GACGGCCAGG CCGTGCGGCT CTACAAGGGC
GACATGGACA AGGCGACCGT GTTCAATGAC AGCCCCGCGG CCCAGGCGCG CGCCTTTCAG
GACGCGGGCT GTGCCTGGTT GCACCTGGTG GACCTGAACG GGGCCTTCGC GGGCGCGCCG
GTCAATGCCG CGGCGGTGGA GGCGATCCTC GCGGAGACCT CGGTGCCGGC GCAGCTGGGC
GGTGGCATTC GGGACATGGC AACGATCGAG ATGTGGCTCG GCAAAGGCAT CGCGCGGGTG
ATCCTGGGCA CGGTCGCGGT CGAGGACCCG GAACTGGTGC GCGCGGCGGC CAAGGCGTTT
CCCGGACAGG TGGCCGTAGG GCTGGATGCA CGGGCCGGCC GGGTGGCCAC GCGGGGCTGG
GCCGAGGAGA CCGACCTGAT GGTCACCGAC CTCGCGCGAT CCTTCGAGGA TGCGGGCGTG
GCGGCGATCA TCTACACCGA TATCGACCGG GACGGGGCGA TGCAGGGGCC GAACGTGGCG
GCCACGGCGG CCCTGGCGCG GGCCACGTCG ATTCCGGTGA TTGCCAGCGG GGGGGTCAGT
TCGCTCGACG ATCTGCGGGC GCTCAAGGCC TCCGGCGCGC CTCTGGACGG CGCGATTTCG
GGGCGGGCGC TCTATGATGG GGCGATCGAT CTGGCCGAGG CGCTGGCGGT TCTGGCGGAC
TAG
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| Protein sequence | MILYPAIDLK DGQAVRLYKG DMDKATVFND SPAAQARAFQ DAGCAWLHLV DLNGAFAGAP
VNAAAVEAIL AETSVPAQLG GGIRDMATIE MWLGKGIARV ILGTVAVEDP ELVRAAAKAF
PGQVAVGLDA RAGRVATRGW AEETDLMVTD LARSFEDAGV AAIIYTDIDR DGAMQGPNVA
ATAALARATS IPVIASGGVS SLDDLRALKA SGAPLDGAIS GRALYDGAID LAEALAVLAD
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