Gene Dshi_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2570 
Symbol 
ID5713467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand- 
Start bp2737743 
End bp2738384 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID641268493 
Producttranscriptional regulator 
Protein accessionYP_001533904 
Protein GI159045110 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.565298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000000111966 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAGAAT CGTCGAAATC CAGCGGCGAG GCCGCTTATG GCGCGCTGCT CGATGCCATT 
CACTCCGGCG AGTTCCGCCC GGGGGACAGG TTGCGCGAGG AATCCGTGGC CGAGCGATTG 
CGCCTGTCGC GCACGCCGGT GCGAGAGGCC CTGCGGCGGC TGGAGGCCGA GGGGGTGGTG 
GAGCATCGGC CACGGGTGGG CGCGGTCATT CGCAAGCTCT CCCAGCGTGA GATCGTGGAG 
CTTTACGAGA TGCGCGTCGT CCTGGAGCGC ACGGCCGCGG CCATGGCGGC CAAGCACGGT 
GCGGAAGCGG AGTTCGACGC GCTATCAGAC CTCAATGAGG CGATCAGGGC CGAGCGGACG 
CACCCGGCCA GGGCAGCGGA GATCAATCAG CGGTTTCATC TCGGGCTCTA TCATGCGGGC 
CGCAATCGGT TCCTGATGGA TGCGGCGCGG GCGCTCAACA ACTCGTTGAT CCTGCTGGGG 
CCGACCACCT TCACCGACCA GGCCCGGATC GACCAGGTCA CCGCCCAGCA TACCGATATC 
GTCGCGGCCC TGCGGGCGCG CGATTCGGAC GCGGCCAGCG CCGCGGCGGA GACACATTTG 
CAGACCTCCC TGCGGCACCG ATTGCGGGCG TGGGACGCAT GA
 
Protein sequence
MKESSKSSGE AAYGALLDAI HSGEFRPGDR LREESVAERL RLSRTPVREA LRRLEAEGVV 
EHRPRVGAVI RKLSQREIVE LYEMRVVLER TAAAMAAKHG AEAEFDALSD LNEAIRAERT 
HPARAAEINQ RFHLGLYHAG RNRFLMDAAR ALNNSLILLG PTTFTDQARI DQVTAQHTDI 
VAALRARDSD AASAAAETHL QTSLRHRLRA WDA