Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2569 |
Symbol | |
ID | 5713466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2736718 |
End bp | 2737746 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641268492 |
Product | hypothetical protein |
Protein accession | YP_001533903 |
Protein GI | 159045109 |
COG category | [R] General function prediction only |
COG ID | [COG3180] Putative ammonia monooxygenase |
TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.110832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000135786 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGGCA TTTTCACCGC CTTCGCGGTC GCGCTTGCGG GCGTCGGGCT GTTTCAATGG CTGGACCTGC CGCTGCCCTG GCTTCTGGGG CCGATCTTCG CCTGTCTGAC GGCGGCGATG CTGGGCGTGC CCATGCGCAG CCTCAAGCCG ATCAACGAGG CGACGCGCAT GGTCCTTGGC GTGGCGGTCG GGGCCACGCT GACGCCGCCG GTCCTGGCGA CCTTTCCCGC CATGTGGCCG ACCCTGATGC TGGTTCCGGT GATGGTTGTT GCGATCGGAC TGGTGGGGGT ACCTTATTTC CGCAGGCTGT GGGGGTATGA TCCGGCCACG GCCTATTACT CGGCCATGCC GGGCGGGTTG CAGGACATGC TCCTTTTCGG GGAGGAGGCG GGGGGCAATG TGCGGACCCT GTCTCTGATC CATGCGACGC GGGTGACGGT GATCGTCGTG GCATTGCCCT TTTTGCTCAA GGGGGTGTGG GGGGCGGATC TGGGCAATCC GCCGGGTGCG TCTCTCGGTG TCGTGCCGGT TCACGAGATG GGTTTGATGG GGCTGTGCGC GATTGTCGGC TGGTGGGGCG CGCGTCGGAT CGGGCTGTTC GGCGCGGCCA TCCTCGGGCC GATGATCGTG ACCGGGGCTG CGGCCATGTC CGGACTTCTG GAGAACCGCC CGCCGGCGGA GGCGATATGG GCCGCGCAGT TCTTCATCGG CGTGACCATC GGCTGCAAAT ACGTGGGCAT CACCTGGGGC GAGATCCGAC GCGATCTTGC CGCGGGTCTG GGGTTTTGCG GGATCCTGAT CGTGCTGACG CTGATCTTCG TCGAAGGCGT CTATCTCGCC GGTCTTGCGC CGGGAATGGA GACGCTGCTG GCCTTTGCAC CGGGGGGGCA GGCGGAGTTG ACGGTGCTGG CGCTGATCGT GGGCGCGGAT GTGGCCTTCG TGGTGGCGCA CCATATCCTG CGGATTTTCG TGGTGATCCT CGGCGCGCCC ATCGTGGTGC GGATGCTTGG GGACAAGGAC GCGCGCTAG
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Protein sequence | MIGIFTAFAV ALAGVGLFQW LDLPLPWLLG PIFACLTAAM LGVPMRSLKP INEATRMVLG VAVGATLTPP VLATFPAMWP TLMLVPVMVV AIGLVGVPYF RRLWGYDPAT AYYSAMPGGL QDMLLFGEEA GGNVRTLSLI HATRVTVIVV ALPFLLKGVW GADLGNPPGA SLGVVPVHEM GLMGLCAIVG WWGARRIGLF GAAILGPMIV TGAAAMSGLL ENRPPAEAIW AAQFFIGVTI GCKYVGITWG EIRRDLAAGL GFCGILIVLT LIFVEGVYLA GLAPGMETLL AFAPGGQAEL TVLALIVGAD VAFVVAHHIL RIFVVILGAP IVVRMLGDKD AR
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