| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2567 |
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| Symbol | |
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| ID | 5713464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2733766 |
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| End bp | 2736072 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268490 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001533901 |
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| Protein GI | 159045107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0479714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000000485501 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTCAC TGGGGGCCAT TCTTGCACTG GCTTTGGCAG GGTTGCAGCT GCTGGCGGTG
GCCGTGGTGG TGTTCTCGTC CTACTTCACA TCCGAGCGCA GCCTGCTGGA ACACGCCAGA
AGCCAACTCT ATGACGTTGG CACCAACGTG ATCCAGCATA CTAAATGGTT CATGTCTCCG
GCCCGCAGTG CGGCGGAACT GTCCACCGCG CTTGCCACCA ACCAGATCGT GCGCCGCGAA
GACCGCGACC ACCTCGAAGG CCTGCTGTTT CAGCAACTCC GCTCGGCCCC CCAGTTCGCC
GGGGCCTATT ACGGAGATTC CGACGGGAAC TTCGTTTACG TCAAACGGGA AGGCGACCAG
CAATACCTGA CCAAGATCGT CGATGTGGAG TCCGCCCACC GCGCCCTGTT CATCCGTCGC
AGCGACGATT TCGCGGATAT CGGGCGGTAT GTCGACCCGA CGGACACCTA TGATCCCCGC
GCGCGCCCTT GGTATATAGA GGCGACCGCA TATCGCAGCA GCATCTGGAC CGATCCCTAT
ATCTTCTTTA CTTCGCAATC CCCCGGCATC ACGGCCGCCA CGCCGGTGGT GGGGTTCAAG
GGGAATGTCC AGGGGGTCGT GGGTGTCGAT ATCGAGATCG CCGAGCTGTC GAATTTCCTA
TCCAACCTGC GGATCGGGAA GACCGGTGCA GCCCTGATCC TCAATCGCAA CGGGGATGTG
ATCGCCCACC CGAACCCGGA TCTTCTGACG ACCAAGGGCG AGGGCGGCAC CCTGCAATTC
CCCTCGATTA CCGAGATCGA CGATCCCATT GCACGCGCCG CGTTCGGCGA CCGCCTCGGC
CCGGACGGGG TGGCCGTGGA CAGCCCGATC CAGTCTGACT TCGAGCTTCT GGGCGAGCGG
TTCGTGTCCC TGATCATGCC CTTCGGGCTC GACGACATTC CCTGGACCAT CGTTCTTTAT
GCCCCACAGG TGGATTTCAC CGGAGCTCTG AAAGAGAACC GCGCCCAGAA CACCCTCATC
GCCATTGCCG TGGCGGCCAC CACCGCCCTC CTGGGCCTGG CCCTCGCCAA CCGGATTCAC
GCCCCCGTGC GCGCCTTTGC CGTGCGCTCC TCGCTGATCT CCCAGGGCGA GGTCGACCCG
AACGAACCCC TGCCCAGCAC CTACAAGGAA CTGGAGAACG CCAACACCGC GCTGGTCCAC
GAGATCTCGG AGCGCAGGCG CACAGAAACC GAGTACCGCG AGATCTTCGA GCGCGCCTCC
CGCGGCATGG TCCGGATCGA CAGCAGCTCC GGTCGGCTCA AGCGCGTCAA CGAAAGCTTC
GCGCAACTGC TCGGCTACAG CCCCGGCGAT CTCGAAGGGG TGGATTTCCG CATGCTGCTC
GATCCCGAAG AAACCGAGAT ACGGGCTGAG TTCAGCGACT GGATCGGCGG GCAGAAAGCC
TTCGGGTTCG AGGCGAAAGT CCTGCACCGG GGCGGCGAGA CCGTCTGGAT CAGCTTCAAC
GGCATCTACG TGCACGAGGG CGGCCCGGAT GATACCTATG TGGTGGCCAC CATTGACGAC
ATCACCCAGG CCCGCGCCAC CGAAGAGACC ATCGAAACCC TGAACCGGGA GATCGCGTAT
TTCTCGCGGC AGGAAATGAT GGGGGAGCTG GCAACCGGGC TGGCCCATGA ACTGAACCAA
CCCCTGACCG CGATCACCCA GAACGTGGAT GCCGCCCAGC TGACCATCGA GAAGACACCG
AACCGCATGA ATGACGTACG CGCGCTTCTC GGCGAAATCG ACGATCACGC CCATCAGGCC
GCCGACATCA TCCGGGCGCT GAGGGCCCTC GTGCGCAAGG ACGAGAACGT CCCCAGCGAT
TTCGGCATCA TCGAACTGGT GACCCAGGCC CGCCGCCTCG TTCTGCCCGA AGCGCGCCAG
CACAGCGTCG ATTTCGTGCT CCCCAAGGGC AAGGAAATCA TGGTTCGGGC GGTCAAGGTG
CAGGTCGCCC AAGTGGTGGT CAACCTGCTG CGCAACGCCG TGGAGTCCCT CGCGCTGCTG
GACAGCGACG CACGCATCCT GCGCGTTAGC GCCACCCGGG AGGGCGACCA TGTCCGCGTC
GTCGTCGAAG ACAACGGGCC GGGCATCGAC GACGCGCTGG AATTGTTCAC ACCCTTCGAG
ACCACCAAGC GGGATGGAAT GGGGCTCGGC CTGTCGATCA GCCGTACGCT GATCGAGGCG
AATGGCGGCA AGATCTGGCA CGAACGCTCT GGTCAGATGA CCCGGTTCTG TTTCACCCTG
CCGGTGAGGG GAATCGGTGA TGTCTGA
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| Protein sequence | MKSLGAILAL ALAGLQLLAV AVVVFSSYFT SERSLLEHAR SQLYDVGTNV IQHTKWFMSP
ARSAAELSTA LATNQIVRRE DRDHLEGLLF QQLRSAPQFA GAYYGDSDGN FVYVKREGDQ
QYLTKIVDVE SAHRALFIRR SDDFADIGRY VDPTDTYDPR ARPWYIEATA YRSSIWTDPY
IFFTSQSPGI TAATPVVGFK GNVQGVVGVD IEIAELSNFL SNLRIGKTGA ALILNRNGDV
IAHPNPDLLT TKGEGGTLQF PSITEIDDPI ARAAFGDRLG PDGVAVDSPI QSDFELLGER
FVSLIMPFGL DDIPWTIVLY APQVDFTGAL KENRAQNTLI AIAVAATTAL LGLALANRIH
APVRAFAVRS SLISQGEVDP NEPLPSTYKE LENANTALVH EISERRRTET EYREIFERAS
RGMVRIDSSS GRLKRVNESF AQLLGYSPGD LEGVDFRMLL DPEETEIRAE FSDWIGGQKA
FGFEAKVLHR GGETVWISFN GIYVHEGGPD DTYVVATIDD ITQARATEET IETLNREIAY
FSRQEMMGEL ATGLAHELNQ PLTAITQNVD AAQLTIEKTP NRMNDVRALL GEIDDHAHQA
ADIIRALRAL VRKDENVPSD FGIIELVTQA RRLVLPEARQ HSVDFVLPKG KEIMVRAVKV
QVAQVVVNLL RNAVESLALL DSDARILRVS ATREGDHVRV VVEDNGPGID DALELFTPFE
TTKRDGMGLG LSISRTLIEA NGGKIWHERS GQMTRFCFTL PVRGIGDV
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