| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2552 |
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| Symbol | |
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| ID | 5713449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2715478 |
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| End bp | 2718297 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268475 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533886 |
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| Protein GI | 159045092 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00108717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGGCG ATTTCACACG TTGGAACCGG GCCGGGCTGC GCCGCTTTCG CTATGTCGGT
GGCAACGCGG TCACCTTTCT GGAAACGCTG CGTGCGCATC TGGCGGAGGG ATACCGCGCA
CCCGGGGAGG CCTTGCCGCG CTGGAGCGAT CTGGTCACCC GCAACCCGGT CGCAGCGGAC
GAGGACCCGG CCGAGCGCGA AGCGCGGCTT CTGGCGCAAT ACGCGGACAT CCGGCGGGAT
CATGGGTGGG AAATCCTGCG GGCCTTTGCC CGGTCCACCC ATGTTCTGAC CGAGCATATC
GATGCCTACG CCAATGAGAC CTTTATCCGT ACGGCGACCC AGTGGGACAG CGTGCGGCAT
CTGATCAAGC TGCTGGATGC GCGGCCCGCG CCGCCTGCAT CAGCGCGCAC GGTCCTGGCG
TTTGATGCCA GCGAGGCGGG CAAGCTGGCC AAGGGGTTCC AGGTCAAGGC CGGGCCGGGT
GGCGACGGGC CGCCCCCGGT CTTCGAGACG ATTGCCGATC TGGATCTGGA CCCTGCGCTC
AATGTGCTGC GCCCGACCGA CTGGAATCGC GGTCAGGAGG ATTTCGCCTA CAGCGCTGCA
GCGAGTGGTC ATGTCGCTAG TTTTCCCCTG CCCGATTCCG GGATGGCGCC GGTGGTGGGC
GAGATCGCGG TGCTGGAGAT CGCCGCGGCA GACGGGGTGT CCGCGCCGAG TGCTTTCGGG
GTGCAGGTCA ACCCCGGCAT AGGGGGCATG GCCATGTTGC AGGGCCAGAG CCCCGCAGGC
GGGGGCGACC TGACGGTCAA GCGCTGGCGC GTGGCGCTCC ATGCGGGCGC GCGTCTGGTG
CAGACGCCGC GGCTTGCAGG TCCGGACGTG GTGATCCTGA CACCGGAGCA CAATCTCGCC
GCCGGGCGCA GCACAGTGAC CTGGCTTGCG GGCGGGACCT GGCGCACGGC GCGGGTGATG
GAGATCGACG GGGACCGCGT GCGGTTGGAC GGCGGTCTCA TGCCAGGGGT CGGCGCGGAT
CTCTACGCGA TGGTCGAGGC GCGGTCTCAG GTGCTGCCCG GGTCAGAAAC GCTTGTTCTG
CCGTTCGAGC GGGGCGCGTC CGGGCGGGTC TGGTCCGTGG CGCTTGTCGA CAAGACGGCG
GATGTCCGGA CCAAGAGCTC CAATGACGCG CTGGGCAACT CGTTCCCGGA ATATGACTTC
GTCACGGGCC TCGCCACGGC GCTCTATGTG CCCGGAGGAA GCGATCCGGT GGCCCGGGTC
GAGGTCGCGG CCCCTTCCGG TCTTGTGCTC GGCGGCGCGG TGGAGGGGCT GCGTCAGGGC
GACTGGATCG TCTCGGCGGG TTCGCAGTTG CAGGCGGTTC GGGTGACGGC GGTGACTGAG
CGGGAGGGCG ATACAGCCAT CGATACGGTC CCGGAGATTA CCGATCTGCA AGCGCCCGTG
CACTTGCACT TCGCCGATGT CTTGCGTCCG CTGGATCATG ATCGCAACCG TAGTTCGGTT
CATGATGCCA CGGCACTCTC AGACCGGGTG ACGCGCGTGC TGGTCGATGT CGGGGGCTCG
GCGCGGCTGG CCCGGGGGCG ACAGGTTATA CTTGAGGATC CGGAGCGCTC CCATGCCGGG
GAGATCACCG CGACCGGTCC GGGCTGGATC GAAATTGCGC CGGTGATCCC GGGAACGGAA
TTGACCGACC CCCTCGATGT CACGCCGTTC GAGCGGTGGT CCACCACCCT CTCTGCAAAT
GTGGTGACCG CCGATCACGG GGAAACACAG GACCTGAAGA TCATCGGCTC GGGGGATGCG
ACGGCCTCCA ACCAGGTGTT CGAGATCAAG GCGCAGGAGC TCTCGTTCAC CACCGACCCG
CTGATGCCAG CAGGGGTGCG GGCGGGGGTC GAGATCTTTG TGGGAGCCCG GCGCTGGCGC
CAGGTGGGCA ACCTGCGCGA CAGTGGGCCG ACGGATGCGG ATTACGAGGT CCGGGTGGCC
GAGGATGGCA CGGTCACTGC CCATTTCGGC GATGGGCGCC ATGGGCGACG TTTGCCCACG
GGCACAGACA ATGTCCGCGC GACATGGCGC AAGGGCGTAG GTTCGGTGGG CAATTTGCCG
CGCAGCACGC TGCGCAAGAT CGTGCAGCCG GACCCACGGC TCTCCGCTGT CCGGCAGCCT
GTGGCAGCGG CGGGCGGGGC AGAGGCCGAA GGGGTCGAGT CTCTGCGGGA CAATGCGGCG
GCGGGCCTTC TGACCCTTGG GCGCGCTGTC TCGGTCAGTG ATTTCGGCAA GCTCGCGGCG
CAGAACGCCC AGGTCTTGCA GGCCATGTCC TACAGGGTGG CGCCGGGTAC GGCACGTGGC
GAACTCGTTG AGGTGGTCGT GGTCCCGGCA GGTGGGCGCA TGGGCACACT GGGCGAGGAT
CTGACGCAAT TTCTCGCAGG AAACGGGCTC CCCGGTGTCA ATCTGCGAGT GGTGCCGTAT
GTGGCGTTGC CACTGAGCCT GTCGGTTCGG ATCGAAGTCA GGAGCGCCGC GTACGATCCC
GATGAAGTGG CCGAGGTCGT CCGCGTGAAG ATCAGTGAGG CCTACGCGCT GGAGCGTGCA
CAACTCGGTG CGCCGCTCTT CCGCAGTCAG ATCCTGCACC TCGTGGAAGG GGTAGAGGGG
GTCGAGAACG CCCGGGCCGA TATCCTGACC GCGGGGTGGG CGGGGATCAC GCCCGCGCCC
GGCATCGGCC TGGGCACAGG GAGCGGGGTG CGCAGCGTGC GCCCGCGGCC GAACCAGATG
ATCCACCACG ACCCGGACCT GTCCCAGCTC ACCATCAGCA CACAGGAGTT CACGTTGTAG
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| Protein sequence | MSGDFTRWNR AGLRRFRYVG GNAVTFLETL RAHLAEGYRA PGEALPRWSD LVTRNPVAAD
EDPAEREARL LAQYADIRRD HGWEILRAFA RSTHVLTEHI DAYANETFIR TATQWDSVRH
LIKLLDARPA PPASARTVLA FDASEAGKLA KGFQVKAGPG GDGPPPVFET IADLDLDPAL
NVLRPTDWNR GQEDFAYSAA ASGHVASFPL PDSGMAPVVG EIAVLEIAAA DGVSAPSAFG
VQVNPGIGGM AMLQGQSPAG GGDLTVKRWR VALHAGARLV QTPRLAGPDV VILTPEHNLA
AGRSTVTWLA GGTWRTARVM EIDGDRVRLD GGLMPGVGAD LYAMVEARSQ VLPGSETLVL
PFERGASGRV WSVALVDKTA DVRTKSSNDA LGNSFPEYDF VTGLATALYV PGGSDPVARV
EVAAPSGLVL GGAVEGLRQG DWIVSAGSQL QAVRVTAVTE REGDTAIDTV PEITDLQAPV
HLHFADVLRP LDHDRNRSSV HDATALSDRV TRVLVDVGGS ARLARGRQVI LEDPERSHAG
EITATGPGWI EIAPVIPGTE LTDPLDVTPF ERWSTTLSAN VVTADHGETQ DLKIIGSGDA
TASNQVFEIK AQELSFTTDP LMPAGVRAGV EIFVGARRWR QVGNLRDSGP TDADYEVRVA
EDGTVTAHFG DGRHGRRLPT GTDNVRATWR KGVGSVGNLP RSTLRKIVQP DPRLSAVRQP
VAAAGGAEAE GVESLRDNAA AGLLTLGRAV SVSDFGKLAA QNAQVLQAMS YRVAPGTARG
ELVEVVVVPA GGRMGTLGED LTQFLAGNGL PGVNLRVVPY VALPLSLSVR IEVRSAAYDP
DEVAEVVRVK ISEAYALERA QLGAPLFRSQ ILHLVEGVEG VENARADILT AGWAGITPAP
GIGLGTGSGV RSVRPRPNQM IHHDPDLSQL TISTQEFTL
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