| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2548 |
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| Symbol | |
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| ID | 5713445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2703739 |
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| End bp | 2707950 |
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| Gene Length | 4212 bp |
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| Protein Length | 1403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268471 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533882 |
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| Protein GI | 159045088 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.300555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.511808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCC ACGCCAAGAC ACGGGAGCCG AAAACCACCG GTGCCCCTGT GGCGGCGAGG
GGTCGCGCCG CACCTGTTCG CCCATGTCTG GAGCCGGGGC TCATTCAGCG CGCGGCCACG
CTTGGCAAGC GCGACGATGT CTATGAGCGG GAAGCGGAGC GCGTGGCGAA GGCCGTATCC
AGTGGGGATC GGCCGGAACC GGTCAGCATG GCGGCCCCAA GCGGTGTCCC GCAGCGGCTG
ACCGAAACGG ATGCCGAGGC CGAGCGACCT GGGGAATATC TCATCCAGCC CAGCCGCGAG
GGCGCGCAAG GGGGCGAGCC GCCGCTGCGC AAGGGCTTCC TTCAACGGCT TTTGGAATTG
CGGCGCGGCG GGCGGCCTCT GCCTGACACG GTGCGCAGCG AGATGGAGGC CCGGATCGGC
GAGGACTTCT CCGACGTGCG CATCCATACC GGGCGGGAGG CATCGGACCT CGCCGCGGAG
ATCCACGCCC GCGCCTTTAC CGTGGGGCGC GATGTGGTTT TCGCGGGCGA CAGTTTCGCA
CCGGACACTT TGTCGGGTCG CCATCTGATC GCCCATGAGT TAACCCATGT GGCGCAGCAG
CGGGGCCCGC GCGCTGACAG TGCCGTGGCG CAGGCCGCAC CGGGCGGACT GCAACGGGAC
GTTTCGGACT ATATCCCCGA CCTGCCGGAT GTCGGCAGCA TTGTAATGGG GCTGGTGCGC
GACTACGCCC CGCGGCTTGC CCCGATCCTC GACAAGGGGC CGTTCAACTG GCTGACGGAT
CAACTCGCAG GCGTGTTCTC TGGCGTGATC GACAAGGTCA CGGCGCTCGA TCCGGGCCAG
CATGTCACCG CCCTGGTCGA GACATTCGGC GGGATGGTGG AGAGCGCCGC CGAGATCATC
GGCGCGCTCG TGACGGGCGA TTGCGGGCCG ATGATGGCGG CGCTGGGCCG GATGAAGGCC
CTGGTGCTCG AGGTCGCGGG CAAGGCCTGG GACAAGACAA AGGCGTTCTT TGCCCCGGTC
GGTGCGTTTT TCTCCGACCT GTGGTCTTCG GTCTCGGCGG CGGGCAGTGC CGCGATCACC
TGGATCAAGG AGTTCGCTGG CGAGATCTGG ACCGGCATCG AGGAAATAGG TGCCCATATC
TGGGACAAGA CCAAGACGAT CCGCGACTAC GGCATGGGCG CGTGGGATTG GCTGTCCGAG
AAGCTTTTCG GGGCAAGCGA TGCCGGGAAG GCCACGGATG GAAATGGGGT CCTTGGGCTG
ATCACCGACA AGGCCATGGA GGCCTGGGAC TGGGTCAAGG CCCGCACGCG ACCCGTGTGG
GAGCCGGTCA ATGAGGCCAT TGAGACAGTC AACGAGTTGA TCCCGCCGGA CTTCGTTGCC
GATCTCGGCG AGAAGATGAC CAGCTTCGCC GATGACGTCG AAAGCACCGC GGACGAACTG
GACCAAGGCA ATTCGCTGGC CGAGAACCGC GAGGCGCTGT CAGGGGTGTT GCCGTCCCTG
GACGGGATCA TCACGACTGT GCGGGGCGTG ATCGAAGGTG CGGGCAGCTT CCTGACCACC
ACCATCGGCA AGGTCGCGGG CAAGGTCACA AGCTTCATGA CGAAGCTGCG CAGCAGCGAT
CTGGTCTCCG GTCTTGCGAG CGCACTGGGC TGGCTTGAGA CCGCGATCGA GGATGTCTCA
GGCTGGGCGG CGGACAAGGT TGGCACGCTC TTCGAGTGGT ACCTGAAGGC CTTCGATTTC
CTGTCGCCCT TCGTGAAGCA GTTGATCGAG ATCGTCGGCA AGGTGGTCGA GATCGCGGTC
GATATCCTTC TGTTGCCCAA ACTTCTTCTG ACCAAGGCAT GGGACCTGAT CCCCGAGTGT
ATCCGGGAGC CGATCAAGAG TTTCGTGTTG GACACGGTGC TGGCGCAAGT GCCGATATTC
AACCAGTTGC TCAAGATCGG TGGCCTGTGG AAGAAGGTGC AGGAGGTCGC GTTCGAGATC
CTCGCCTCGA TTTTGGCCAA GGGCGATATC CTCAAGGCCG CCTGGACCTT CTTCAAGGAG
ATGCTGGCGC TGATCGGCTT GCCAGCGAAA CTCGTGGTGC AGATCCTCGC AAAGGCCGCG
CGGGCCTACG GGATGATCCT GCGGAACCCC ATCGGTTTTC TGATCAACCT GCTGAAGGCG
ATGAAGGAGG GCTTCACCCT CTTTTTCGAC AACATCCTGA CTCACCTGAT GAACGGGGTG
GTGGGGTGGC TGACCGGGGC GGTGAGCGCG GCTGGTCTGA GCTTTCCGAC CGAGCTCACT
TTCCAGGCGG TGCTCGATTT CGTGCTGCAA CTGCTCGACA TCACTGTGGA GCGGGTTCTG
GAGCGGCTGG AAAAGAAAAT CGGACAGGAG AAGGTCGCCA AGATCCGCAA GGCGCTCGAT
TACGCCGACG GGGTCTGGGA GTTCATCCGG GTGATCGTGA CCGAAGGCGT TGGCGGGCTT
TGGCGGTTCA TCCAGGAGAA GCTGTCGAAC CTGTGGTCCA TGGTGTTGCA GAGCACTATC
GGCTGGGTGG TCGAGAAGAT CATCACCGAG GCCACGGTGA AGATCCTGTC CTTCCTCGAC
CCTTCGGGTA TCATGGCGGT GATCAACAGT TGCATCGCGA TCTATCGGGC GATCGAGACC
TTCGTACAGC AGCTCAAGGC GATGTTGCAG ATCGTCTCGA AGGTGCTGGA CGGCATCGTC
GGCATTGCCA AGGGCGCCAT AGACGTGGCG GCCGGGTTCC TCGAGAAAGC CATGGCCGAC
AGCCTGCCCG TCGCCATCGC ATTCCTCGCC GATCAGGTGG GGTTGGGCGA TTTGTCCGAC
CGGATCAAGG AGTTCGTCGA GGGGCTGCGA GATTTGGTCA ATGGCGCCAT CGACTGGCTC
ATCGACAAGG CGCTGAAGTT CGGGCAGGGG TTCTTGAAAC TGGTCGAGAG CGGCGTGGAT
CTTGCCAAAG CCGGGGTCCG CAAACTGAAA GATTGGTGGA CCGCGCGGAC GGATTTCAAG
ACGACGGGCG GCGAGCCGCA CAGCATTTCG ATCGAAGGCC AGGGGCGCAA TGCCAAGGTC
ATCCTCCGCT CCACCCCGGT GACCTATGCG GATTGGATTG CCGACACGAG CAACTTCACC
CTGGACACGC CCAAGAAGCA GAAGGCCTAT CAGGATGCCG TGGTGAAGTC CGGCGAGCTT
GATGCGGCGA TCTCGGCTGC GGCCTCCAAC CCGTCATCGG CAACTCCCGA GGCTAGGGAT
GCCACCCAGG GGGATCACGG TCCCAAGATA CAGGCTCTTG TCAACGAACT CGGAGACCTG
ACATCCGTGT TCATGCCCAA CTCGGCAACG AAGGATGAAG AAAGCAGTCC GCCGATCTAC
GGGGGCCTCT ACAAAAACAA GTACGGCACA TCGGTCACGG TCCAGCGACT GACAAACCAG
GTGCCGAAAG GGGGCACAGC CGCGAGCGGG CGCGGAGACC GGTGGACCGA ACTCGCCCCT
CGTGGCACCA GCCCTGGCTC GCCCGATGGT TATTATGTCC GCGGCCACCT TTTGAACCAG
AAACTCGGCG GACCTGGGGC GAAGTGGGAG AACCTCACCA TTCTCACGCA GGATGCGAAC
AATCGCGAGA AGGCGTCCCA CGAGAAAAAG TTCGAGAGCA AGGTAAAGGA TGCGGTGATA
CCGGATGCGG GCACGATCGC GCCCAAGGCC GTCAACTTTG TCTGTACCGT GAATTACGGA
CGGGAAGACC GGGTCGATCA AGCCGATCGG TTCCTGGAGA GAACGACACC CGCTGTGCGA
TCCAACCGTT TGAGTATCGC GCAGACGGAA AGTATCGCGC GCATCATCCG CGCGGAGACC
GACGTTCCCT TTTCCATGGA TTGCTCGGCG TTCGAGTTGA ACGACGACGG CGCGAAGAAA
GCCGAGTTGG TAACCTTCCG GGTGCAGAAT CCGATCAAGA CGGATGACAA GGACTACTAC
GTCAAATCCG ATACTGCCAA ACCGACGCTC AACATGAACA CGGCGAACCG CAACCAGCTC
AAGCTCGTGT ATGGGATCGG CGACAAGACG GTGGACAAGT TCTTTGCAAT TCGGACTGCG
CGCATGGCCA AGTCACCGCC CGAACCGTTC GAGAGTCTCG ACGATCTCAA GGCGCTCAAG
TCCGGGGGGG CCGTGCTCTT CAACAAGATA CAGATCGAAG AGCTTCCCCT CACCTACAAA
CTCCAATTCT GA
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| Protein sequence | MLTHAKTREP KTTGAPVAAR GRAAPVRPCL EPGLIQRAAT LGKRDDVYER EAERVAKAVS
SGDRPEPVSM AAPSGVPQRL TETDAEAERP GEYLIQPSRE GAQGGEPPLR KGFLQRLLEL
RRGGRPLPDT VRSEMEARIG EDFSDVRIHT GREASDLAAE IHARAFTVGR DVVFAGDSFA
PDTLSGRHLI AHELTHVAQQ RGPRADSAVA QAAPGGLQRD VSDYIPDLPD VGSIVMGLVR
DYAPRLAPIL DKGPFNWLTD QLAGVFSGVI DKVTALDPGQ HVTALVETFG GMVESAAEII
GALVTGDCGP MMAALGRMKA LVLEVAGKAW DKTKAFFAPV GAFFSDLWSS VSAAGSAAIT
WIKEFAGEIW TGIEEIGAHI WDKTKTIRDY GMGAWDWLSE KLFGASDAGK ATDGNGVLGL
ITDKAMEAWD WVKARTRPVW EPVNEAIETV NELIPPDFVA DLGEKMTSFA DDVESTADEL
DQGNSLAENR EALSGVLPSL DGIITTVRGV IEGAGSFLTT TIGKVAGKVT SFMTKLRSSD
LVSGLASALG WLETAIEDVS GWAADKVGTL FEWYLKAFDF LSPFVKQLIE IVGKVVEIAV
DILLLPKLLL TKAWDLIPEC IREPIKSFVL DTVLAQVPIF NQLLKIGGLW KKVQEVAFEI
LASILAKGDI LKAAWTFFKE MLALIGLPAK LVVQILAKAA RAYGMILRNP IGFLINLLKA
MKEGFTLFFD NILTHLMNGV VGWLTGAVSA AGLSFPTELT FQAVLDFVLQ LLDITVERVL
ERLEKKIGQE KVAKIRKALD YADGVWEFIR VIVTEGVGGL WRFIQEKLSN LWSMVLQSTI
GWVVEKIITE ATVKILSFLD PSGIMAVINS CIAIYRAIET FVQQLKAMLQ IVSKVLDGIV
GIAKGAIDVA AGFLEKAMAD SLPVAIAFLA DQVGLGDLSD RIKEFVEGLR DLVNGAIDWL
IDKALKFGQG FLKLVESGVD LAKAGVRKLK DWWTARTDFK TTGGEPHSIS IEGQGRNAKV
ILRSTPVTYA DWIADTSNFT LDTPKKQKAY QDAVVKSGEL DAAISAAASN PSSATPEARD
ATQGDHGPKI QALVNELGDL TSVFMPNSAT KDEESSPPIY GGLYKNKYGT SVTVQRLTNQ
VPKGGTAASG RGDRWTELAP RGTSPGSPDG YYVRGHLLNQ KLGGPGAKWE NLTILTQDAN
NREKASHEKK FESKVKDAVI PDAGTIAPKA VNFVCTVNYG REDRVDQADR FLERTTPAVR
SNRLSIAQTE SIARIIRAET DVPFSMDCSA FELNDDGAKK AELVTFRVQN PIKTDDKDYY
VKSDTAKPTL NMNTANRNQL KLVYGIGDKT VDKFFAIRTA RMAKSPPEPF ESLDDLKALK
SGGAVLFNKI QIEELPLTYK LQF
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