| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2543 |
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| Symbol | |
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| ID | 5713440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2699475 |
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| End bp | 2700533 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268466 |
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| Product | putative binding protein |
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| Protein accession | YP_001533877 |
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| Protein GI | 159045083 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.721383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT CCAACCTGGA GGAGACACCC ATGATCAACA GAAGACTTTT CACCGCCGCG
ATGGTCGCGT CCCTGCCCCT GGCCGGCACT TTCGGGGCGC CCGCCCTTGC CACCGACGAA
CTGCGCGACA TCACTTTCGT GCAGCCCAGC CCCTCGGCGA TCAACTCTTT CCCGGTTTTC
GTCGCCATTG GCGAAGGCTT CTTCGAGGAA GAAGGCCTGA ACGTCACGGT CGAAGCGATC
AACGGCTCGG GCGCCGTTCT GCAGGCCCTG TCCGCAGGCC AGGCGCATTT CGGGCGGCCC
GGCCCCGGCC CCCTGATCGC GGCCCGTGCG CGCGGCGTGG ACGCAGTCCA TATCTATAAC
GTGGCCGCGC GCAGCAACTT CGGCATCGCG GTACAGGAAG GCTCCGACAT CCAGGATGTG
GAAGGGCTGC GTGGCAAGGT GATCGGCACC GGTACCGCCG ATGGCGCCGA AGTCGGTTTT
GCGCGCAACG TGATGACCGG CGCCGGCATG ACGGCAGGCG AGGACTACGA GTTCCTGACA
GTTGGTGATG GTGGCCCGGC AACAGCTGCC TTCCTGAATG GCGAGATCGA TGCATACTCG
GCCTCGACAG CGGATACGGC GATCCTGAAC CAGCGCGGCA TGGCCGTGCG CGACATCACG
CCCGCGGAAT TCGGGCGGTT CTTCGGCAAT GGCATCGCGA CCATGGGCGA AACCATCCGC
AACGATCGCG AACTGGTCGA AGCCTGGAGC CGCGCCTTCG CCAGGGGTCA TGCTTTTGCG
CTGGACGATG CAAACCGCGA AGCCGTGCTT GCACATCTGG CCGCCGGCAA CCCCCAGGAA
GGTGAGGACA AGGAGTTCCA ATCCGCCCTG TTCGACGCAG TCCGGTCCAA GACGATCCCG
ACGGACGATG CCGAACACCT GGGCTGGTAC CCGGGTGCGG TCTGGGCCGA ATGGCAGGAC
GCGCTGGTCG CCGGTGGAGA GCTGCCCGGT CCTCTGGAGG ATCTCGACGC GGCCTGGACC
AATGAATTCG CTGAAATCGG CGCCGCGGCA GTCAACTGA
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| Protein sequence | MTKSNLEETP MINRRLFTAA MVASLPLAGT FGAPALATDE LRDITFVQPS PSAINSFPVF
VAIGEGFFEE EGLNVTVEAI NGSGAVLQAL SAGQAHFGRP GPGPLIAARA RGVDAVHIYN
VAARSNFGIA VQEGSDIQDV EGLRGKVIGT GTADGAEVGF ARNVMTGAGM TAGEDYEFLT
VGDGGPATAA FLNGEIDAYS ASTADTAILN QRGMAVRDIT PAEFGRFFGN GIATMGETIR
NDRELVEAWS RAFARGHAFA LDDANREAVL AHLAAGNPQE GEDKEFQSAL FDAVRSKTIP
TDDAEHLGWY PGAVWAEWQD ALVAGGELPG PLEDLDAAWT NEFAEIGAAA VN
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