| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2542 |
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| Symbol | |
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| ID | 5713439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2698518 |
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| End bp | 2699444 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268465 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533876 |
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| Protein GI | 159045082 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.548938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG CGACGCTGGC CGTGGGGGGT AACCCCATGG CGGTAGTTTT ACTATCGAAT
GGTGCGGCGC TGAACTATGC CGCCTGCGCC TGGGATGTGC CCGGGGAGGC TGGCGATGCC
CTACGCACCG GCACGTTGCA GGCGCTCATC GACGCGGGCC CGGACGCACT GGACGCCTTG
CGCGAAATCG TCGAGGCCGC CGAGAACGGG TCTTATCGCG ATGCGCGGAT CTCCCTCGAC
AATCCGTTCC TGGCGCCACT GCACACGCCG CGCAAGAATA TCTTCTGCGT GGGCCGGAAC
TATGCCGAAC ACATTGCTGA GGGCGAGCGC GCCCAGAACG CAAAGATCGG CATCACCGAG
CATCCGGTCT ATTTCACAAA GCCTGCCACG GCAGTCGTGG GTCATGGTGG AGATGTTCTG
ATTTTCCCGT CCGTGTCGGA AAAGATCGAC TACGAGGTCG AACTGGCCGT GGTGATCGGA
ACCACTGGTC GCGATATCCC AAAGGACCGC GCCTTCGCGC ATGTGTTCGG CTACACCATC
CTCAACGACA TTACCGCACG CGATGTTCAG CGCCGCCATG GCGGGCAGTA TTTCAAGGGC
AAGTCCCTGG ACGGCTCCTG CCCGATCGGT CCCTGGATCG TTACGGCGGA CGAAATCACG
GACCCGCAGG ACCTGTCGAT CAGCTTGTCG GTCAATGGCG AGCTGCGCCA GAACGGCTGG
ACCCATGACA TGATCTTCGA CATTCCGACC CTGATCGCAT CGCTGTCCGA GGGCCTGACC
CTGGAGCCGG GGGATATCAT CGCAACCGGC ACACCTTCGG GCGTGGGCTA CGCGATGGAC
CCGCCGCAAT ACCTCAAGCC GGGCGACACG GTGATCTGCG ATATCGCAAA TATCGGACAA
CTCAAGAACA CGGTGCGCGT TGCATGA
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| Protein sequence | MKLATLAVGG NPMAVVLLSN GAALNYAACA WDVPGEAGDA LRTGTLQALI DAGPDALDAL
REIVEAAENG SYRDARISLD NPFLAPLHTP RKNIFCVGRN YAEHIAEGER AQNAKIGITE
HPVYFTKPAT AVVGHGGDVL IFPSVSEKID YEVELAVVIG TTGRDIPKDR AFAHVFGYTI
LNDITARDVQ RRHGGQYFKG KSLDGSCPIG PWIVTADEIT DPQDLSISLS VNGELRQNGW
THDMIFDIPT LIASLSEGLT LEPGDIIATG TPSGVGYAMD PPQYLKPGDT VICDIANIGQ
LKNTVRVA
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