Gene Dshi_2540 details

Gene Information

• Locus tag: Dshi_2540
• ID: 5713437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 2696948
• End bp: 2697499
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641268463
• Product: hypothetical protein
• Protein accession: YP_001533874
• Protein GI: 159045080

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 0.560007
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCGTGTTC TCAGCGCCGG AGGGCTGAAC GAGGGCGTCC GGCGTTGCGT CGAGGCCTTT 
GCCAGCAGCA CCCTGCGCGC TGACACCACA GCGCAATTGG GCTGCATTTC AGTCGGTGCC 
GCCGTTCCGA CCGGCGCGCC CCGCTATGAC CTCAGCAGCG AAAGCTCCCT GTACTGCACG 
CTTACCGCAG CGGAGGCGCT GATCCACAAC CGCGCCTCCA GCGGCATGAA GATCGCACGC 
CTGATCGAGC GGCTCGGCCT TTCGGAAATA ACCTCAACGA AGACCATCCG AACCCAAACC 
GGAGCGGAAA ACATGGAGGC GCTGGCGAGG CGACGGTCTG CACGCCCCCT GGGCTTCCGA 
CAGGTCACCG AGATCCGGTT GCATGCGCAT CTGGGCATCG AGCTTGCCGG CATTCTGCCC 
GACGACCTCG TCCCCCGGAC ATGCTGTTCT GCCGGTCTCT CGAACACGGG CCACCATGAC 
GAGCCTCACC TGGAGTGCTC GCCTATTTCG GCTCCGAGGA GGGCTGGCGA ATACTCGCAG 
ATGCGGGTCT GA 

 

Protein sequence

MRVLSAGGLN EGVRRCVEAF ASSTLRADTT AQLGCISVGA AVPTGAPRYD LSSESSLYCT 
LTAAEALIHN RASSGMKIAR LIERLGLSEI TSTKTIRTQT GAENMEALAR RRSARPLGFR 
QVTEIRLHAH LGIELAGILP DDLVPRTCCS AGLSNTGHHD EPHLECSPIS APRRAGEYSQ 
MRV