Gene Dshi_2519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2519 
Symbol 
ID5713416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2682147 
End bp2682581 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID641268442 
Producthypothetical protein 
Protein accessionYP_001533853 
Protein GI159045059 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0396534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CGGCATTCAC ACCCTGGGCC TCGTTGTCGG GGGGCGTTCT GATCGGGGTC 
GCCGCGACCC TGCTGATGCT GGTGCTCGGT CGCGTCATGG GCGCGACCGG TGTGCTCGCC
GGTTTGGTCC AGCCGTCCTC GGGACAGGAT TTCGCCTGGC GTGCCGCGCT CCTGGCGGGC
ATGGTCACGG GCCCTGCCGT TGTTTGGCTG ATCACCGGCC AGATGCCCGC CGTGCAGGTC
CCGGTTTCGA CCGTGGCCCT CGTGATCGGC GGTCTGATCG TCGGTATCGG TGTGACCTTC
GGGTCGGGCT GCACCTCCGG GCACGGGGTG TGCGGCATGG CGCGGTTGAG CCCGCGGTCG
ATCGTGGCGA CGCTCACCTT CATGGCGGCG ACCTTCGCGA CCGTCTTCGT CGTCCGTCAC
GTGATCGCAG GGTGA
 
Protein sequence
MIETAFTPWA SLSGGVLIGV AATLLMLVLG RVMGATGVLA GLVQPSSGQD FAWRAALLAG 
MVTGPAVVWL ITGQMPAVQV PVSTVALVIG GLIVGIGVTF GSGCTSGHGV CGMARLSPRS
IVATLTFMAA TFATVFVVRH VIAG