Gene Dshi_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2493 
Symbol 
ID5713390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2649470 
End bp2650336 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content68% 
IMG OID641268417 
Producthypothetical protein 
Protein accessionYP_001533828 
Protein GI159045034 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.977219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTG ACGCGCCTGA AAACGGCGCA CCGCTGACCG ACTGGATCGG GCGGACCGAG 
ACCGTGGCGG GCTGCGTGCC CCCCACGGTC GCCACCATGA TCCACGCCAC GCTTGCGCGC
GCGGGCCGCC CCTGCCCCGG CCCGGGCGAT GTCTTGCCAG CCCTGTGGCA TTGGTATGCC
TTCCCCCCGG CGGTGGGGAT GGAGGATCTG GGTGCCGACG GGCACCCGGC CCTTGGCGGG
TTTCTGCCCC CGGTGCCCTA TGAGCGGCGG ATGTGGGCCA GTGGTGCGCT GGAATTCCAC
GCAGATCTGC GCGTCGGCGA GCAGATCGAG AAAACCTCCA CCATCACCGG CGTCGAGGAA
AAGACCGGCT CCACCGGGGG CATGGTGTTC GTCACCGTTG CGCACGAGTT GCGCGGGGCG
GCAGGCCTTG CGGTGCGCGA GACGCAATCC ATCGTCTACC TGCCCATCGC GCCGGAGTTC
CGCCCCCCGC CGAAGAAGCC CGGCCCCGTG GACAGCCTGG TTTTCGACGT GACGCAGCCG
GTCTCGACCG CGCTGCTTTT TCGCTATTCG GCGATCACCT TCAATGCCCA CCGGATCCAT
TTCGACCTGC CCTATGCGCA GGAAGTGGAG CATTATCCGG GCCTTGTGGT GCACGGGCCG
TTGCAGGCCA ACCTGCTGAT GGCGGAGGCG ACCGCCTGGA AGGGGCGCCG CCCGGACCGG
TTCCGGTTTC GCGGCGTGCA TCCGATGTTT CACGACACCG GGCTGACCCT GCGCGGGGTG
CGCGAGGGGG CGCATGCACT GAAAATGTGC ACTGTGGCCG ATGCGGGCTA CATGGGTTTG
ACAGCAAGTG CAGACTGGGA GGACTGA
 
Protein sequence
MPLDAPENGA PLTDWIGRTE TVAGCVPPTV ATMIHATLAR AGRPCPGPGD VLPALWHWYA 
FPPAVGMEDL GADGHPALGG FLPPVPYERR MWASGALEFH ADLRVGEQIE KTSTITGVEE
KTGSTGGMVF VTVAHELRGA AGLAVRETQS IVYLPIAPEF RPPPKKPGPV DSLVFDVTQP
VSTALLFRYS AITFNAHRIH FDLPYAQEVE HYPGLVVHGP LQANLLMAEA TAWKGRRPDR
FRFRGVHPMF HDTGLTLRGV REGAHALKMC TVADAGYMGL TASADWED