| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2471 |
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| Symbol | murE |
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| ID | 5713367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2622969 |
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| End bp | 2624450 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268394 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001533806 |
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| Protein GI | 159045012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.703083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAG GCTACGGGCC GAAATCGCTG GCGGAGCTGG GCTTCGCGGA ACGCGGGCGC
CCGGTGACGG GGCTTGCGCT GGACAGTCGG CAGGTCAAGG AGGGCTACTT GTTCGCCGGC
CTGCCCGGCA GCCGGGTGCA CGGGGCGGAA TTCATCCAGT ATGCGTTGCG CATGGGGGCG
GGGGCGATCC TGACCGATGC GGAGGGCGCG CGGATCGCGC GCGATGTGCT CGACGGCGCC
GAGGTCACCC TGATCGTGGC CGAAGACCCG CGCCAGGCGT TTTCCGCCGC GGCCGCCCTG
TGGTACGGCG CGCAGCCCGC GACCATGGTC GGCGTGACGG GGACCAATGG CAAGACGTCC
GTGGCGAGCT TCACCCGGCA GCTCTGGCAG GGGCTGGGCC ACGCGGCGGC CAATATCGGC
ACCACGGGGA TCGAGGGGGA TTTTTCCGCC GATCTCGCCC ATACCACGCC CGATCCCCTG
ACCCTGCATG CGGCGCTGGC CGAGATGGCC GCGCAAGGCA TCACCCACGC GGCGATGGAG
GCGTCGTCCC ACGGACTCGA CCAGCGGCGG CTGGATGGCG TGCGGCTGGT GGCGGCGGGG
TTCACCAATT TCAGCCAGGA TCACCTGGAC TATCACGAGA CGTTCGAGGC GTATTTTGCC
GCCAAGGCGG GTCTGTTTTC GCGGGTGCTG GCCGATCAGG GCATGGCGGT GATCAACCTC
GACGACCCGA AAGGCGCGGA CATGATGGCG ATTGCCCATG GGGCGGGGGC CGAGTTGCTG
ACCGTGGGCA CGCACAAGGA CGCCATGCTG CGGCTGACCG CGCAGCGCTT CGATGCCGAC
GGGCAGGAGA TGCGGTTCAC ATGGAAGGGC GTGGCGCACC AGGCGCGGCT CAACCTCGTG
GGCGGATTCC AGGCCTCCAA CGTGCTGGTG GCTATGGGGC TCGTCATGGC CACGGGCGCG
CAGGTCGGGG ATCTCGTACC GCTCCTGCCG CGGCTGGCCA CGGTGCGCGG CCGGATGCAG
AAGGTCGCGC GTCGCGAGAA CGGCGCGACG GTCTTCGTGG ACTATGCCCA TACGCCCGAT
GCGCTGAAAA CGGCGTTGCG CGCGCTCCGC CCCCATGTGC TGGGCCGTCT GGTGGTGGTG
TTCGGCGCGG GCGGCGACCG GGATTCGGGC AAGCGCCCCC TGATGGGCGC GGCCGCGGCG
GCGGCGGCGG ATGTGGTCTT CGTGACCGAT GACAATCCCC GCTCCGAAGA CCCCGCGCTG
ATCCGGGCGC AGGTGCGGGC GGGCTGTCCC GAGGCCACGG ATGTGCCGGA CCGGGCGGAG
GCGATCCTGC GCGGGGTCGA CGCGCTGGAG CCGGGTGACG TTCTGCTGAT CGCGGGCAAG
GGGCACGAGA CGGGGCAGAC GGTGGGCGAC GTGGTCTACC CGTTCGACGA CGCGGAACAG
GCCAGCGTGG CGGTCGCGGC GCTCGAAGGG CGGCTGGCAT GA
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| Protein sequence | MSVGYGPKSL AELGFAERGR PVTGLALDSR QVKEGYLFAG LPGSRVHGAE FIQYALRMGA
GAILTDAEGA RIARDVLDGA EVTLIVAEDP RQAFSAAAAL WYGAQPATMV GVTGTNGKTS
VASFTRQLWQ GLGHAAANIG TTGIEGDFSA DLAHTTPDPL TLHAALAEMA AQGITHAAME
ASSHGLDQRR LDGVRLVAAG FTNFSQDHLD YHETFEAYFA AKAGLFSRVL ADQGMAVINL
DDPKGADMMA IAHGAGAELL TVGTHKDAML RLTAQRFDAD GQEMRFTWKG VAHQARLNLV
GGFQASNVLV AMGLVMATGA QVGDLVPLLP RLATVRGRMQ KVARRENGAT VFVDYAHTPD
ALKTALRALR PHVLGRLVVV FGAGGDRDSG KRPLMGAAAA AAADVVFVTD DNPRSEDPAL
IRAQVRAGCP EATDVPDRAE AILRGVDALE PGDVLLIAGK GHETGQTVGD VVYPFDDAEQ
ASVAVAALEG RLA
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