| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2470 |
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| Symbol | murF |
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| ID | 5713366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2621533 |
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| End bp | 2622972 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641268393 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_001533805 |
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| Protein GI | 159045011 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.47082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.53449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC TGTGGACCGC CGCCGAGGCG GCTGCGGCCA CGGGCGGGCA GGCGCGGGGC
GACTGGGCGG TCACCGGCGT GTCCATCGAC ACCCGCGAAC TCGCGCCCGG CGATTTGTTC
GTGGCACTGA CCGCGGCCCG GGACGGGCAT GATTTCGTGG CCCAGGCGCT GGCGGCCGGG
GCGGGCGCCG CGCTGGTCTC CCGCATTCCG GAGGGTGTGG CCGAGGACGC GCCCCTGTTG
CTGGTGCCCG ATGTGCAGAC CGCGCTGGAG GCGTTGGGCC GGGCCGGGCG GGCGCGGACC
GAGGCCCGGG TGATCGCCAT CACCGGCTCG GTCGGCAAGA CCTCCGCCAA GGAGATGATG
CGCGCGGCCC TTGCCAGCCA GGGTCGGGCC CATGCCGCCG AGCGCAGTTT CAACAACCAT
TGGGGCGTGC CCCTGACCCT GGCGCGGATG CCCGCGGGCA CCGAGGTCGC CGTGATCGAG
ATCGGCATGA ACCATCCCGG CGAGATCGCG CCGCTGGCCC GCATGGCCCG GCCTCATGCG
GCGCTGATCA CGACCATCGC CGCCGCGCAT CTGGAGGCGC TGGGCTCGCT GGAGGCGATC
GCAGTCGAGA AGGCGAGCAT TTTCGAAGGG CTGGAGCCGG ACGGGCTGGC CGTGATCCCC
GGCGACCTGC CGCAGACCCC GATCCTGCGC GCCGCCGCCG AGGACGCCGG GGCGCGGATC
GAGAGCTTCG GCACGGGCGC GGGCAATACC CACCGGCTGA GCGATGTGCA GGCGGTCGGG
ACGGCGGCGG TGGCGCGGGC GCAGCTTTCT GGTGCGGAGA TGGCGTTGAA GATCGCCACC
CCCGGCACCC ATTTCCTGGA GACCGCGCTG GGCGTTCTGG CCTGCGTCGC GGGCGTGGGC
GCGGACCCGG CGCGCGCCTT GATGGCGCTG GGGGCCTGGG CGCCGCCCTC GGGCCGAGGC
ACGCGGGAGC GGCTGCAGCT CGACCCGGTG ATCGAGGCGA TGTCGATCGA GCTGATCGAC
GATGCGTTCA ACGCCAACCC GACCTCGATG GGCGCGGCCC TCGACATGCT GGCCCAGGCT
GCCCCCGCCC ATGATATCGG GCGGATCGCC AAGGGGCGCC GGATCGCCAT TCTCGGCGAC
ATGCTGGAGC TCGGCCCGGA CGAGGCCGCG ATGCACGCCG CGCTTGCCGC CCATCCCGCC
ATGGCGCAGA TCACCCTGGT GCATTGCGTC GGGCCCCGGA TGCAGGCCCT GCACGCGGCC
TTGCCCGAGG ACAAGCGCGG TCGCTGGGTC GAGACGGCGC AGGCGCTCGT GCCTCACGCG
CATGCGCTGG TGGACGCGGG GGACGTGGTT CTGGTCAAGG GGTCAAAGGG CAGCCGGGTC
AGCCTTGTTG TTGACGCCCT GCGCAAACTT GGGCATCCCG CATCCCGGTA TGAGAGTTAA
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| Protein sequence | MSALWTAAEA AAATGGQARG DWAVTGVSID TRELAPGDLF VALTAARDGH DFVAQALAAG
AGAALVSRIP EGVAEDAPLL LVPDVQTALE ALGRAGRART EARVIAITGS VGKTSAKEMM
RAALASQGRA HAAERSFNNH WGVPLTLARM PAGTEVAVIE IGMNHPGEIA PLARMARPHA
ALITTIAAAH LEALGSLEAI AVEKASIFEG LEPDGLAVIP GDLPQTPILR AAAEDAGARI
ESFGTGAGNT HRLSDVQAVG TAAVARAQLS GAEMALKIAT PGTHFLETAL GVLACVAGVG
ADPARALMAL GAWAPPSGRG TRERLQLDPV IEAMSIELID DAFNANPTSM GAALDMLAQA
APAHDIGRIA KGRRIAILGD MLELGPDEAA MHAALAAHPA MAQITLVHCV GPRMQALHAA
LPEDKRGRWV ETAQALVPHA HALVDAGDVV LVKGSKGSRV SLVVDALRKL GHPASRYES
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