Gene Dshi_2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2469 
SymbolmraY 
ID5713365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2620435 
End bp2621520 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID641268392 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001533804 
Protein GI159045010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.182094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.577098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTATT GGCTGACCTC GATTTCCGAT GGCGGGGACG CCTTCAACCT GTTCAGGTAT 
ATCACCTTTC GCGCCGGTGG GGCGTTCTTC ACGGCGCTGA TCTTCGGCTT CATCTTCGGC
CGTCCGCTCA TCAACTTGTT GCGCAAACGG CAACGATTCG GCCAGCCGAT CCGCGAGGAC
GGTCCCGAAA GCCACCTGGA GACCAAGCAG GGCACGCCGA CCATGGGGGG CCTGTTGATC
CTGTCGGCGC TGACGCTGGC GACGCTGCTC TGGGCGCGGT GGGACAACGG CTATGTCTGG
CTGGTGCTGT TCGTCACGGT CAGTTTCGGG CTGATCGGAT TCATGGACGA CTTTCAGAAG
GTCACCAAGA ACTCCCACGC GGGCGTGTCG GGGCGGGTGC GGCTGGCCAT GGGGTTCGGT
ATCGCGGGGA TCGCGGGGGC GGGGGCGCTG CTGCTGCATC CGGAGCCCTT GGCGGGGCAA
CTGGCCCTAC CGGTGTTCAA GGACACGCTG ATCAACCTGT CGATCCTGTT CATCCCGTTC
TGCATGATCG TGATCGCGGG TTCCGCCAAT GCGGTGAACC TCACGGATGG TCTGGACGGG
CTGGCGATCA TGCCGGTGAT GATCGCCGCC GGAACGCTCG GGGTCATTGC CTACGCGGTG
GGGCGGGTCG ACTTCACCTC TTATCTCGAT GTGCATTACG TGCCGGGCAC GGGCGAGATC
TTCGTCTTCA CCTCGGCGCT GATCGGGGGT GGGCTGGGCT TTCTGTGGTA TAACGCGCCG
CCCGCGGCCG TGTTCATGGG CGACACCGGG AGCCTTGCGC TGGGTGGCGC CCTTGGGGCC
ATCGCCGTGG CCACCAAGCA CGAGATCGTG CTCGTGGTGG TGGGCGGCAT CTTCGTGGTC
GAGGCGCTGT CGGTGATCAT CCAGGTCGCC TATTTCAAGA AGACCGGCAA GCGCGTTTTC
CTGATGGCCC CGATCCACCA CCATTTCGAG AAGAAGGGCT GGCAGGAGAG CCAGATCGTG
ATCCGGTTCT GGATCATCTC ACTGATCCTG GCGCTGATCG GGCTGGCGAC GCTGAAGGTG
CGCTAG
 
Protein sequence
MLYWLTSISD GGDAFNLFRY ITFRAGGAFF TALIFGFIFG RPLINLLRKR QRFGQPIRED 
GPESHLETKQ GTPTMGGLLI LSALTLATLL WARWDNGYVW LVLFVTVSFG LIGFMDDFQK
VTKNSHAGVS GRVRLAMGFG IAGIAGAGAL LLHPEPLAGQ LALPVFKDTL INLSILFIPF
CMIVIAGSAN AVNLTDGLDG LAIMPVMIAA GTLGVIAYAV GRVDFTSYLD VHYVPGTGEI
FVFTSALIGG GLGFLWYNAP PAAVFMGDTG SLALGGALGA IAVATKHEIV LVVVGGIFVV
EALSVIIQVA YFKKTGKRVF LMAPIHHHFE KKGWQESQIV IRFWIISLIL ALIGLATLKV
R