| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2444 |
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| Symbol | pdxA |
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| ID | 5714100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2587296 |
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| End bp | 2588300 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268367 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001533779 |
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| Protein GI | 159044985 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.848805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCCA GACTTGCCAT CGTGCCCGGG GATCCTTCGG GGATCGGGCC GGAACTGATC
GCCAGGCTGC TGGCCGAAGA CGGCGTGCGC GAGGCCGCCG ATATCCTGCT GGTGGGTGAT
GCCCATCTGT GGCGGCGCGG CGCGGACCAG GCCGGGCTGG AGATCCCGCT CGACACCATC
GACCCGCGCG ACAGCGGCAG CTTCACCGGG CTGGCCCATC TCGACCTCGA CACCATCGCG
CCGGAGGATG TGCGGATCGC CGAGGTCACC GTGGCCGGGG GCGCGACGTC GCTGCGCTGC
CTCGACAAGG CGCTCGACCT GGCCCAGGCC GGGCAGGTGG ACGGGGTGCT CTTTGCGCCC
TTCAACAAGT CGGCCATGAC CGCGGCGGGG CTCGATGCCG AGGACGAGCA TCGCTACATG
GCGCGCTACC TCGGGTTCAC CGGCTATCAT TCCGAGATCA ACGTGCTCGA CGACCTGATG
ACCACCCGGG TGACCAGCCA TATCGGTCTG AAAGACGTGG CGGCCCAAAT CGACGGTCCG
GGGATCGAGC GCGCCATCGA GCTCGCCCAT GCCACCCTGG CGCGCTCGGG CAAGGCGCGC
CCCCATGTGG CCGTGGCCGC GCTCAACCCC CACGCGGGCG ACAACGGCAA GTTCGGGCGC
GAAGAGATCG ACGTGATCGC ACCGGTCGTG AAGGCCTGCC AGGACCGGCA GATGAACGTC
ACCGGCCCCT GGCCCTCGGA CACGGTCTTC CTCAAGGCCC AGCGGGGCGA AGTCGATGCC
GTCGTCACCA TGTATCACGA CCAGGGCCAG ATCGCGATCA AGCTGATGGG GTTCGAGCGG
GGCGTGACCG TCGCGGGCGG CCTGCCGATC CCGGTGGCGA CCCCCGCCCA TGGCACCGCC
TTCGACATCG CGGGCAAGGG GATCGCCAAT GTGGGCGCCA CCCGGCAGGC TTTCGACCTG
CTGGTCCGGA TGGCGCGCAA CGCCAGGGAC GAGGCGGCGG CATGA
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| Protein sequence | MRPRLAIVPG DPSGIGPELI ARLLAEDGVR EAADILLVGD AHLWRRGADQ AGLEIPLDTI
DPRDSGSFTG LAHLDLDTIA PEDVRIAEVT VAGGATSLRC LDKALDLAQA GQVDGVLFAP
FNKSAMTAAG LDAEDEHRYM ARYLGFTGYH SEINVLDDLM TTRVTSHIGL KDVAAQIDGP
GIERAIELAH ATLARSGKAR PHVAVAALNP HAGDNGKFGR EEIDVIAPVV KACQDRQMNV
TGPWPSDTVF LKAQRGEVDA VVTMYHDQGQ IAIKLMGFER GVTVAGGLPI PVATPAHGTA
FDIAGKGIAN VGATRQAFDL LVRMARNARD EAAA
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