| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2437 |
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| Symbol | rhaA |
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| ID | 5714093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2579647 |
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| End bp | 2580885 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268360 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001533772 |
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| Protein GI | 159044978 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTACG AGAACGCGAA AGCCGCCTTT GCGGAGTGGG GTGTGGACAC CGAGGCCGCG
TTGGCGCGGC TGAAGACCAT CCCGATTTCG ATGCATTGCT GGCAGGGCGA CGATGTTGTC
GGTTTCGAGC AGAAGACCGG CAGCTCCGGC GGCGGCATTC AGGCCACCGG CAACCACCCG
GGCCGCGCGC GCACGCCCGA CGAGTTGCGC GCGGATCTGG AATTCGCCTA CGCGATGATC
CCGGGCCGGC ACCGGTTGAA CCTTCACGCG ATGTATCTCG ACACCGAGGC GACCCCGGAC
CGGGACGAGA TCGAGATCGC GCATTTCGCG CCCTGGGTCG ACTGGGCCCG GGCGCAGGGG
ATCGGCCTGG ATTTCAACCC CACCTTCTTT GCCCATGCCA AGGCCGACGA CAACCTGACG
CTCAGCCACC CCGATCCGGG CATTCGCGAC TTCTGGATCG AGCATGGCAA ACGCTCACGG
GAGATCGCGG CCGGGATGGG GGCAGCGCTT GGATCGGCAT GTGTGAACAA CATCTGGGTG
CCCGATGGCT ACAAGGACAC GCCGGTGGAC CGGATGGCTG CGCGGGCGCG TCTGGAGGCG
TCGCTCGATG CGATGCTGGC GCCGCCGCAG GATCGGGCCC GGATGCTGGA CGCGGTGGAA
AGCAAGCTCT TCGGGATCGG GGTCGAGGCC TGCACGGTGG GCAGCCACGA ATTCTACATG
GGCTACGCGA TCCGCAAGGG CACGTTGTTG TGTCTCGACA TGGGCCATTT CCACCCGACC
GAGAACATCG CGGACAAGCT CAGCGCCGTT GCCCTGTCCC TCGATGAGAT CCTGCTGCAC
GTGTCGCGCC CCATGCGGTG GGACAGCGAC CACGTGATCC TGCTCGACGA TGACATCCTG
CAGATGGCGC AGGAACTCGT CAGTGCCGAT TTGCTGGGGC GCACCCGGAT CGGGCTGGAT
TTCTTCGACG CGACGATCAG CCGGACCGCT GCCTGGGTGA TCGGGACGCG CAACATGCAA
AAGGCGCTGT TGCGCGCGCT GCTGATGCCG CTCGACAGGT TGCGGGCGGC GGAAGATGCC
CTGGATTTCA CCACCCGGCT CGTGGTGACG GAAGAGGTCA AGGATTTGCC GTTCGGCGCG
GTCTGGGCCG AGTTTGCCGC CCGCGAAGAC GTGCCGAATG GCCAGAAGTT GATCCGCGAA
CTCGACAGGT ATCAGGCGCA GGTGTCAGGG CGCGGGTGA
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| Protein sequence | MGYENAKAAF AEWGVDTEAA LARLKTIPIS MHCWQGDDVV GFEQKTGSSG GGIQATGNHP
GRARTPDELR ADLEFAYAMI PGRHRLNLHA MYLDTEATPD RDEIEIAHFA PWVDWARAQG
IGLDFNPTFF AHAKADDNLT LSHPDPGIRD FWIEHGKRSR EIAAGMGAAL GSACVNNIWV
PDGYKDTPVD RMAARARLEA SLDAMLAPPQ DRARMLDAVE SKLFGIGVEA CTVGSHEFYM
GYAIRKGTLL CLDMGHFHPT ENIADKLSAV ALSLDEILLH VSRPMRWDSD HVILLDDDIL
QMAQELVSAD LLGRTRIGLD FFDATISRTA AWVIGTRNMQ KALLRALLMP LDRLRAAEDA
LDFTTRLVVT EEVKDLPFGA VWAEFAARED VPNGQKLIRE LDRYQAQVSG RG
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