| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2432 |
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| Symbol | |
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| ID | 5714088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2572906 |
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| End bp | 2573889 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268355 |
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| Product | putative binding-protein-dependent transport system permease |
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| Protein accession | YP_001533767 |
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| Protein GI | 159044973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAC GCCTGATCGC CTCCCGGGAA ACACTGCTGA TCGCGGCGAT CCTGCTGCTG
CTGGCGCTGA TCGCCTCCCG GTTCCCCGCA TTCATCGCGC CGTCGAACCT CGCGCATGTG
TTCAACGATA CATCGCCGCT GATCCTGCTG GCGATCGGCC AGATGATCGT CATCCTGACC
CGGTGCATCG ACCTCAGCGT CGCGGCGAAC CTGGCATTGA CCGGCATGGT CGTGTCGATG
GTCAATGTTG CGGCTCCGGG CCTGCCGATT GTCGTGATCC TCGCCATCGC CATCGGACTG
GGCACGCTGC TGGGCATGTT CAACGGGCTT CTCGTGTGGA AGCTGCAAAT CCCGCCCATC
GTGGTGACGC TGGGGACCAT GACCATCTTC CGCGGCATCA TCTTCCTGAT CTCCGACGGA
AAATGGGTCA ACAGTCACGA GATGAGCCCC GCCTTCAAGG CCTTCCCGCG GGCGGAACTC
CTCGGCCTCC CGGTCCTCAG CTGGATCGCG ATCCTGGCCG TGATCCTGTT CACGATCGTG
ATGACCCGGA CCACCCTGGG GCGTGCCTTC TACGCGGCGG GCGGCAACCC CCATGCCGCG
ACCTACGCGG GCATCGATGT GGGCAAGACC CAGTTCTGGG CCTTCACGAT CTCCGGCGCC
CTGGCGGGCC TGACGGGGTA TCTCTGGGTC TCGCGCTTTG CGGTGTCCTA CGTGGATATC
GCCGGCGGGT TCGAGCTGGA CGTGGTCGCC GCCTGCGTCA TCGGCGGTGT GTCGATCATG
GGCGGCGTCG GCACCGTCGG CGGCGCGTTG CTCGGGGCCT TGTTCCTCGG CATCATCAAG
AATGCCCTGC CGGTCGTCGA TATCTCCCCC TTCTGGCAGC TGGCCATCTC GGGCGGTGCG
ATCATCATCG CCGTCGCGCT CAATGCCCAG GCCAACCGCA AGAAGGGTCG CATCATCCTC
AAGCGCGCGG AGCAAACATC ATGA
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| Protein sequence | MLKRLIASRE TLLIAAILLL LALIASRFPA FIAPSNLAHV FNDTSPLILL AIGQMIVILT
RCIDLSVAAN LALTGMVVSM VNVAAPGLPI VVILAIAIGL GTLLGMFNGL LVWKLQIPPI
VVTLGTMTIF RGIIFLISDG KWVNSHEMSP AFKAFPRAEL LGLPVLSWIA ILAVILFTIV
MTRTTLGRAF YAAGGNPHAA TYAGIDVGKT QFWAFTISGA LAGLTGYLWV SRFAVSYVDI
AGGFELDVVA ACVIGGVSIM GGVGTVGGAL LGALFLGIIK NALPVVDISP FWQLAISGGA
IIIAVALNAQ ANRKKGRIIL KRAEQTS
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