Gene Dshi_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2416 
SymbolftsZ 
ID5714072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2555094 
End bp2556689 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content69% 
IMG OID641268339 
Productcell division protein FtsZ 
Protein accessionYP_001533751 
Protein GI159044957 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0206] Cell division GTPase 
TIGRFAM ID[TIGR00065] cell division protein FtsZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000147556 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.595095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGA ACCTCACCAT GCCAGAGCAT AACGAACTCA AGCCCCGGAT CACCGTCTTC 
GGTGTCGGCG GCGCCGGCGG AAACGCCGTG GACAACATGA TCGACAAGCA GCTCGATGGC
GTGGAATTCG TCATTGCGAA CACCGACAGC CAGGCGCTGC AGGGCTCCAA CGCCCCGGCC
AAAATCCAGA TCGGCGCGAA AGTGACCGAA GGGCTTGGCG CCGGTGCGCG GCCCAGCGTG
GGCGCGGCCG CCGCCGAAGA GAGCATCGAG GAAATCGTCG ATCACCTCGC GGGCGCGCAT
ATGTGCTTCA TCACCGCGGG CATGGGCGGC GGCACCGGCA CGGGTGCTGC CCCGATCATC
GCGCAGGCGG CGCGGGAGCT GGGTGTTCTG ACCGTCGGCG TGGTCACCAA ACCCTTCCAG
TTCGAAGGCG CCAAGCGGAT GCGCCAGGCC GAGGAAGGCG TCGAGATCCT GCAAAAGGTG
GTCGATACCC TGATCATCAT CCCCAACCAG AACCTGTTCC GGTTGGCCAA TGAGAAGACG
ACCTTCACCG AGGCGTTCTC GATGGCCGAT GACGTGCTCT ACCAGGGCGT CAAGGGGGTG
ACCGACCTGA TGGTGCAGCC GGGTCTCATC AACCTCGACT TCGCGGATGT GCGCGCCGTG
ATGGACGAGA TGGGCAAGGC GATGATGGGC ACCGGCGAGG CCACTGGCGA GGATCGCGCG
ACCCAGGCCG CGGAGAAGGC GATCGCCAAC CCGCTGCTGG ACGAGATCAG CCTGCGTGGC
GCCAAGGGCG TCCTGATCAA CATCACCGGC GGCTACGACC TGACCCTGTT CGAGCTGGAC
GAGGCCGCGA ACCGGATCCG CGAAGAGGTG GACCCGGAAG CCAACATCAT CGTCGGCTCG
ACGCTCGACA CCTCCATGGA AGGGGCGATG CGCGTCTCCG TGGTGGCCAC GGGGATCGAC
GCCGTCGAGG CCCAGCAGGA CGTGCCGACG CCGCGCCGCC GGATGTCCGA GCCGCTCACC
CCGGCATCGA GCTTCGCGGC CGAGCCGGCC GACGAGACGC CGGAGCCGGT CTATCAGCCC
GAGGTCGCCG CGGTCGAGGC CGCGCCGGAG CCGCAAGAGG CCCCCTCCCG CCTCCAGGAG
GTCGCGCAGC GCGCCCCCGC CGAGGAGCCG GTCGAGGAGG ATCTCTTCGC CACCGCCGAG
AGCCGGAAGG TCGAAACCTT CCGCGCCCAG CCCGATGCCT ATGACCCCAA CGGGTTCGAG
CCGGGCTCGC CCGCGTCCGA GTTCGTCGCC CCCCAGCCGC GCAAGCCCGG CACGCCGACC
CCCGAGACCC TCGCGCGCCT GCGCACGGCG GTGAACTCCA CCAAATCGGT CGGGGCCGCG
CCGTCGCGCG CGCCGGCAGA CCCGGGGGAG GGGGCGGAAA AACGCGGCTT CGGGATCAAT
TCCCTGATCA ACCGCATGAC CGGCCAGGCG GCCGATCACG GCCACGCGGC CAGCCCGCAG
GCCCGCCGCC CCAGCCCCGT GAGCGAACCG CAAATGGTCG ACCCGGACCA CGAAAAGGTC
GAGATCCCCG CCTTCCTGCG GCGTCAGGCC AACTAG
 
Protein sequence
MTLNLTMPEH NELKPRITVF GVGGAGGNAV DNMIDKQLDG VEFVIANTDS QALQGSNAPA 
KIQIGAKVTE GLGAGARPSV GAAAAEESIE EIVDHLAGAH MCFITAGMGG GTGTGAAPII
AQAARELGVL TVGVVTKPFQ FEGAKRMRQA EEGVEILQKV VDTLIIIPNQ NLFRLANEKT
TFTEAFSMAD DVLYQGVKGV TDLMVQPGLI NLDFADVRAV MDEMGKAMMG TGEATGEDRA
TQAAEKAIAN PLLDEISLRG AKGVLINITG GYDLTLFELD EAANRIREEV DPEANIIVGS
TLDTSMEGAM RVSVVATGID AVEAQQDVPT PRRRMSEPLT PASSFAAEPA DETPEPVYQP
EVAAVEAAPE PQEAPSRLQE VAQRAPAEEP VEEDLFATAE SRKVETFRAQ PDAYDPNGFE
PGSPASEFVA PQPRKPGTPT PETLARLRTA VNSTKSVGAA PSRAPADPGE GAEKRGFGIN
SLINRMTGQA ADHGHAASPQ ARRPSPVSEP QMVDPDHEKV EIPAFLRRQA N