| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2414 |
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| Symbol | |
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| ID | 5714070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2553013 |
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| End bp | 2553852 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268337 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533749 |
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| Protein GI | 159044955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00110974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.506898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG TGGGGACCCT CCGTAACCGG ATGCTGGCGC TGGGGCTGGC CGTGATCCTG
GCCGCCTGCG GCAGCCAGCA ACCCGAATTC CCCGCCCTGG AGGAATCGCC CCCGGACGTG
ATCTTCAACC GCGCCGAGTT CGAATTGCAG GCCAACAATC TCGACGAGGC CGCGCGTTAT
TTCGGCGAGG TCGAGCGGCT TTATCCGTTC TCCGAATTCG CAAAGCGCGC GCTGATCATG
CAGGCCTTCA CCTATCACCG GAACCGCGAA TACGAGAGCA GCCGTGCCGC GGCACAGCGC
TATCTCGATT TCTACCCGGC CGATGAGGAC GCGGCCTATG CGCAATACCT TCTGGCGCTC
AGCTATTATG ACCAGATCGA CGATGTGGGC CGCGACCAGG GCTTGACCTT CCAGGCATTG
CAGGCCCTGC GCACGGTGAT CGAGGTCTAT CCCGAGAGCA GCTATGCCAA GTCCTCGATC
CTGAAATTCG ACCTCGCCTT CAACCATCTC GCCGCCAAGG AGATGGAGAT CGGGCGCTAT
TACCTCAAGC GCGGCCATTA CGCCGCCGCC ATCAACCGCT TCCGCGTGGT GGTGGAGGAT
TTCCAGACCA CGACCCACAC CCCCGAGGCG CTGCACCGGC TGGTGGAGGC CTACCTGTCG
CTCGGGCTGG AGGGGGAGGC GCAGACCGCC GGCGCGATCC TCGGCTTCAA CTACCAGGCC
ACCGATTGGT ACGAGGACAG CTTCCGGTTG CTGACCGAGC GCGGATTGTC CCCGGACGCG
CAGGAAACCG GTTGGCTCAG CACGATCTAC CGCCAGATGG TGCGCGGCAC CTGGCTCTGA
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| Protein sequence | MTRVGTLRNR MLALGLAVIL AACGSQQPEF PALEESPPDV IFNRAEFELQ ANNLDEAARY
FGEVERLYPF SEFAKRALIM QAFTYHRNRE YESSRAAAQR YLDFYPADED AAYAQYLLAL
SYYDQIDDVG RDQGLTFQAL QALRTVIEVY PESSYAKSSI LKFDLAFNHL AAKEMEIGRY
YLKRGHYAAA INRFRVVVED FQTTTHTPEA LHRLVEAYLS LGLEGEAQTA GAILGFNYQA
TDWYEDSFRL LTERGLSPDA QETGWLSTIY RQMVRGTWL
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