Gene Dshi_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2407 
Symbol 
ID5714063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2544924 
End bp2545631 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID641268332 
Productputative glutathione S-transferase 
Protein accessionYP_001533744 
Protein GI159044950 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00274689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC CCATCGAGCT CTATTTCTGG CCCACGCCGA ACGGCTGGAA GGCCTCCATC 
GCGCTGGAGG AAATGGGCCT GCCCTACACC ACGCATCTCG TGAACATCGG GGCAGGGGAC
CAGTTCAAGC CTGCCTTCCT CGCCATCTCG CCCAACAACC GGATGCCCGC CATCACCGAT
CCCGACGGCC CCGACGGCGC GCCGATCTCG ATCTTCGAGA GCGGCGCGAT CCTGCAATAC
CTCGCGCGCA AGACCAGCCG CTTCTACGGC GCGACCGAGC GCGACCGCAT CGCCGTGGAC
CAGTGGCTGA TGTGGCAGAT GGGCGGGCTC GGCCCCATGG CGGGCCAGGC CCATCACTTC
CTTAAATACG CCCCCGCCAT GGACCCGCCC AACGACCTGC CCTACGCCAA GGACCGCTAC
CGGGCCGAGA CCGGGCGGCT CTACAAGGTG CTCGACACCC AACTGTCCAG GCACGAATTC
ATCGCGGGCG ACTTCTACTC CATTGCCGAC ATGGCCTGCT GGGGCTGGGC GTCGCTCTGG
GAGGGTCAGC AGCAAACCCT CGACGACAAA CCCCACATGG CGCGCTGGCT CGACACGCTG
GCGGCCCGCC CGGGCGTGCA GGCGGGCCGC GCGCTCCATG CCGACAAGCG TGCCGATTTC
CGCAAGGAAA CCGGCGCCCA CGCGTCCCTC TTCAAGACCA AGACCTGA
 
Protein sequence
MTRPIELYFW PTPNGWKASI ALEEMGLPYT THLVNIGAGD QFKPAFLAIS PNNRMPAITD 
PDGPDGAPIS IFESGAILQY LARKTSRFYG ATERDRIAVD QWLMWQMGGL GPMAGQAHHF
LKYAPAMDPP NDLPYAKDRY RAETGRLYKV LDTQLSRHEF IAGDFYSIAD MACWGWASLW
EGQQQTLDDK PHMARWLDTL AARPGVQAGR ALHADKRADF RKETGAHASL FKTKT