Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2407 |
Symbol | |
ID | 5714063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2544924 |
End bp | 2545631 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268332 |
Product | putative glutathione S-transferase |
Protein accession | YP_001533744 |
Protein GI | 159044950 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00274689 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC CCATCGAGCT CTATTTCTGG CCCACGCCGA ACGGCTGGAA GGCCTCCATC GCGCTGGAGG AAATGGGCCT GCCCTACACC ACGCATCTCG TGAACATCGG GGCAGGGGAC CAGTTCAAGC CTGCCTTCCT CGCCATCTCG CCCAACAACC GGATGCCCGC CATCACCGAT CCCGACGGCC CCGACGGCGC GCCGATCTCG ATCTTCGAGA GCGGCGCGAT CCTGCAATAC CTCGCGCGCA AGACCAGCCG CTTCTACGGC GCGACCGAGC GCGACCGCAT CGCCGTGGAC CAGTGGCTGA TGTGGCAGAT GGGCGGGCTC GGCCCCATGG CGGGCCAGGC CCATCACTTC CTTAAATACG CCCCCGCCAT GGACCCGCCC AACGACCTGC CCTACGCCAA GGACCGCTAC CGGGCCGAGA CCGGGCGGCT CTACAAGGTG CTCGACACCC AACTGTCCAG GCACGAATTC ATCGCGGGCG ACTTCTACTC CATTGCCGAC ATGGCCTGCT GGGGCTGGGC GTCGCTCTGG GAGGGTCAGC AGCAAACCCT CGACGACAAA CCCCACATGG CGCGCTGGCT CGACACGCTG GCGGCCCGCC CGGGCGTGCA GGCGGGCCGC GCGCTCCATG CCGACAAGCG TGCCGATTTC CGCAAGGAAA CCGGCGCCCA CGCGTCCCTC TTCAAGACCA AGACCTGA
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Protein sequence | MTRPIELYFW PTPNGWKASI ALEEMGLPYT THLVNIGAGD QFKPAFLAIS PNNRMPAITD PDGPDGAPIS IFESGAILQY LARKTSRFYG ATERDRIAVD QWLMWQMGGL GPMAGQAHHF LKYAPAMDPP NDLPYAKDRY RAETGRLYKV LDTQLSRHEF IAGDFYSIAD MACWGWASLW EGQQQTLDDK PHMARWLDTL AARPGVQAGR ALHADKRADF RKETGAHASL FKTKT
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