| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2402 |
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| Symbol | glyS |
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| ID | 5714058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2537985 |
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| End bp | 2540147 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268327 |
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| Product | glycyl-tRNA synthetase beta chain |
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| Protein accession | YP_001533739 |
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| Protein GI | 159044945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0966728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.754916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC TTCTGATCGA ACTCTTTTCC GAGGAAATCC CCGCCCGGAT GCAGGCCCGC
GCGGCGCAGG ACCTGCAAAA GCTGGTCACG AACGGGCTGG TCGAGGCGGG CATCACCTAT
GCCGGGGCCC GCGCCTATGC CACGCCGCGC CGCCTGACCC TGGTGGTCTC CGACATGCTC
GCCGCCTCCG CGCCCGTGCG CGAAGAGCGC AAGGGGCCCA AGGCCGACGC GCCCGAGAAA
GCCATCGAGG GGTTCCTGCG CTCCACGGGC CTCGGCCGCG AGCAGCTTGA GACCCGCGAG
ACCCCCAAGG GCGACGTCCT CTTCGCCGTG ATCGAAAAAC CGGGCCGCCC GGCGGCGGAG
ATCGTGGCCG AGGTGCTCGA GACCACCATC CGCAACTTCC CCTGGCCGAA ATCCATGCGC
TGGGGCAGCA GCTCCTTGCG CTGGGTCCGC CCGCTGCATC GCATCCTCTG CCTGATCCGC
GATGAAGAGG GGGCCGAAAT CGTGCCCCTG ACCGTCGACG GCATCACCGC CGGGGATGTG
ACCGAGGGCC ACCGCTTCCT GGCACCCGGC GAGATCAAGG TCCACGGGTT CGAGGATTAC
GAGACCAAGC TGCGCCGCGC CAAGGTCATT CTCGATGCCG AGGAACGGGC CGAGCATATC
TGGGCCGACG CCACCAATCA AGCCTTCGCC CAGGGGCTGG AGGTCGTGGA GGATCGCAGA
TTGCTGTCCG AGGTCGCCGG TCTGGTGGAA TTTCCCGTGC CCCTGATGGG GGAGATCGAC
GCGGACTTCC TCGACCTGCC GCCCGAGGTG CTGCAGACCT CGATGAAAGA ACATCAAAAG
TTTTTCAGCG TTCGAGATCT GAAATCCGGC AAAATTGTTC GATTTGTGAC AGTGGCAAAT
ACGGAAACCA CCGATCACGG GGCCACGATA CTCGCCGGAA ACCGCAAGGT TCTCTCGGCG
CGGCTGGCCG ATGCCAAGTT CTTTTGGGAA AACGATCTGA GGATCGCCCG CGCAGGCATG
CAGCCCTGGC GCGAGGCGCT GGAAAACGTC ACCTTCCACA ACAAGCTCGG CTCCCAAGCC
GCCCGCATCG CCCGCATCGC CGATCTCGCC GCCACCCTCG CGCCCCAGGT CGGCGCCGAC
CCGGACGCCG CCCGCACCGC CGCCGAACTG GCCAAGGCGG ACCTCAGCTC GGAAATGGTC
TTTGAGTTCC CCGAGCTTCA GGGCCTGATG GGCCGCTACT ATGCCGAGGC CGCGGGCCAC
CCGGCGGAGA TCGCCGCGGT CGCCCAGGAC CACTACCAAC CCCTCGGCCC CTCCGACGCC
GTGCCCACAG CCCCCCTCAG CATCGCCGTG GCGCTGGCCG ACAAGCTCGA CACCCTCACC
GGCTTCTGGG CCATCGACGA GAAACCCACC GGCTCCAAGG ACCCATTTGC CTTGCGCCGC
GCCGCCCTCG GCGTGATCCG GATCGTGCTG GAGAATGGGC TTCGATTGCC GCTAATTAAT
TCGGTTAAGC ACCACAACTC CGAGAACACT TCGAGACCAC TATTCTCTGC CCTCGTTGCG
CATGCAAAAA CTGATCAAGA ACGTGCCGAC GGTAGCAAAT CGATGAGCGA CTGGAAGGCG
TTGGTTGCCC GCAGTCAGGA CGACCTCCTC TCCTTCTTCC ACGACCGCCT CAAGGTCTTC
CTGCGCGACG AGGGCATCCG CCACGATATC ATCGACGCCT GTCTCGCCAT GGAGGGCAAT
GACGACCTGC TGCTGCTGGT GAACCGCGCC CGCGCCCTTT CGGAAACCCT GAAAACCGAG
GATGGCGAGA ACCTGCTCCA GGGGTTCAAG CGCGCCAACA ACATCCTCAC CCAGGCGGAG
GAGGCCGACG GGGTCGAATA CTCCTACGGC GCGGACCCGA AGTTTGCCGA GACCGACGAG
GAGCGCGCGC TCTTCGCGGC CCTCGACACC GCCGAGGCCG TGATCGACCC GGCGCTCGAA
GCCGAGGATT TCGCCGCCGC CACCGCCGCC ATGGCGTCCC TGCGCGCGCC GCTCGATGCC
TTCTTCGAGG CCGTGCAGGT CAATGCCGAG AACCAGATCC TGCGCCGCAA CCGGCTCAAC
CTGCTCTCCC GCATCCGCGC GACCTGCCTG AAACTGGCCG ATCTGACCAG GATCGAGGGT
TAA
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| Protein sequence | MPELLIELFS EEIPARMQAR AAQDLQKLVT NGLVEAGITY AGARAYATPR RLTLVVSDML
AASAPVREER KGPKADAPEK AIEGFLRSTG LGREQLETRE TPKGDVLFAV IEKPGRPAAE
IVAEVLETTI RNFPWPKSMR WGSSSLRWVR PLHRILCLIR DEEGAEIVPL TVDGITAGDV
TEGHRFLAPG EIKVHGFEDY ETKLRRAKVI LDAEERAEHI WADATNQAFA QGLEVVEDRR
LLSEVAGLVE FPVPLMGEID ADFLDLPPEV LQTSMKEHQK FFSVRDLKSG KIVRFVTVAN
TETTDHGATI LAGNRKVLSA RLADAKFFWE NDLRIARAGM QPWREALENV TFHNKLGSQA
ARIARIADLA ATLAPQVGAD PDAARTAAEL AKADLSSEMV FEFPELQGLM GRYYAEAAGH
PAEIAAVAQD HYQPLGPSDA VPTAPLSIAV ALADKLDTLT GFWAIDEKPT GSKDPFALRR
AALGVIRIVL ENGLRLPLIN SVKHHNSENT SRPLFSALVA HAKTDQERAD GSKSMSDWKA
LVARSQDDLL SFFHDRLKVF LRDEGIRHDI IDACLAMEGN DDLLLLVNRA RALSETLKTE
DGENLLQGFK RANNILTQAE EADGVEYSYG ADPKFAETDE ERALFAALDT AEAVIDPALE
AEDFAAATAA MASLRAPLDA FFEAVQVNAE NQILRRNRLN LLSRIRATCL KLADLTRIEG
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