Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2400 |
Symbol | |
ID | 5714056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2534372 |
End bp | 2535064 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641268325 |
Product | hypothetical protein |
Protein accession | YP_001533737 |
Protein GI | 159044943 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.459771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.693933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTTG GACAAACCGT TTTGCGGTCT GCATTGGCAG GCCTTTTTAT TGCAACTGGC TCTCTGTCCC TGGCCGATGT GACGGTCATG TCGTCCAACA ACCCCACCAA GGCCATCGAC CTGGAGCTGC GCGGTCTGCT CAGTACCGAA CAGGGCATGC TTTCGGCCGT GCCCTCCGAC CGGTTGCAGC GGCTGGCCTC GCCGGTCACC ACCAGCCCGC TGCCCGCGGA GCGCCGCTAC AGCCGTGAGT GGATCGATGC CCAGCCCCCC GTGAGCGGCG GCGAGGCGTG GGAATGCCTG GCGGAGGCGC TCTATTTCGA GGCCCGCGGC GAGACCGTGA AGGGGCAGTT CGCCGTGGCG GAGGTGATCC TCAACCGGGT CGAGTCGGCG CGGTATCCGA ATTCCGTCTG CGCCGTGATC AACCAGGGCA CCGGGCGCAA ATACCAGTGC CAGTTCACCT ATACCTGTGA CGGGCACCCG GAGCGGATCG CCGAGCCGCG GGCCTGGGAA CGGGTCGGCA AGGTCGCGAA GATGAGCCTG CAGAGCGCGA CGCGGCCCCT GACCGATGGC GCGACCCATT ATCACACGAC CGCCGTGAAC CCCGGCTGGG CGTCGAAATA CATCCGCACC GCCGCCATCG GCGTGCACCG GTTCTACCGG CAGTATTACC CCGGCCGCAC CGCGTCGCGG TAA
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Protein sequence | MMFGQTVLRS ALAGLFIATG SLSLADVTVM SSNNPTKAID LELRGLLSTE QGMLSAVPSD RLQRLASPVT TSPLPAERRY SREWIDAQPP VSGGEAWECL AEALYFEARG ETVKGQFAVA EVILNRVESA RYPNSVCAVI NQGTGRKYQC QFTYTCDGHP ERIAEPRAWE RVGKVAKMSL QSATRPLTDG ATHYHTTAVN PGWASKYIRT AAIGVHRFYR QYYPGRTASR
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