Gene Dshi_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2392 
Symbol 
ID5714048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2525802 
End bp2527001 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID641268317 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_001533729 
Protein GI159044935 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.245572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG AACAGACCGA TATTCTGATT TCCGGCGGCG GCGTGGCAGG ATTGTCCGCC 
GCCGCCGCCT TTGGATCCGC CGGGTTCCAG GTGATCGTGG TCGACCCCGC CCCGCCGGTG
ACCGAGGGCG CGGCGGACGG CGCCGACATG CGGACCACCG CGTTCCTGCA GCCCTCCCGC
GAGGTGCTGG AAAAGGCAGG GCTCTGGGCG CGGCTGGCAC CTTTCGCAGC CCCGCTGCAG
GTGATGCAGA TCATCGATGC CGGCGGGACC GAGCCCGTGG CCCGGGTGCA GAAGGCCTTC
AACGCAAGGG ACATCTCCGA CGATCCCTTC GGCTGGAACC TGCAGAACTG GCTTTTGCGG
CGCGAGATGG TCGCACGGCT CGAGGAGCTG CCGAACGTCA CCTTTCGCCC CGGGGTCGGC
ACCGCGGACG TGCTGGCGCG CGAACGCGAG GCCCGGGTGC GGCTGACCGA CGGGACCATG
GTCTCGGCGC GGCTGCTGAT CGCGGCGGAC GGGCGAAACT CCCCGGTGCG CAACGCGCTG
GGGATCGGCG TCCGGACCAC GCGGTACGGC CAGAAAGCGC TGGCCTTCGC GGTCACCCAC
CCGATCCCGC ACGACAATGT CTCCACCGAG ATCCACCGCT CCGGCGGCCC CTTCACCCTG
GTGCCCCTGC CGGATCTGGA GGGCCAGCCG CGCTCCGCCA TCGTCTGGAT GGAGCGGGGA
CCGGAGGCGC TGCGCCTCGC ATCCTGCGAC GTGGCAGAAT TCGAAGCCGA GATGACCGCC
CGGTCCACCG GGTTGCTGGG CCCGCTCAAG CTGGTCTCCA GACGGTCGGT CTGGCCGATC
ATCAGCCAGA TGGCGGAGCG GCTCACCGGC CCGCGCACGG CCCTGATCGC CGAGGCCGCC
CATGTGGTGC CGCCCATCGG GGCGCAGGGG CTGAACATGT CGCTGGCGGA TGTGCGGGTG
CTGCTGGAGC TGGCCGAGGC CGCGCCGGAC ACCCTCGGCA GCCCGGAGAT GCTGCAGGCC
TACGCGCGCA AACGGGCACC GGATGTGCGT ACGCGGATCA CCGGGATCGA CCTGCTGAAC
CGCGCCTCCA TGGCCGGGGC ACAGCCGCTT CGGGACGCCC GGGCGCAGGG GCTGAAGGCG
CTCTACGGCC TGGCCCCGGT GCGCAAATCG CTGATGCAGC TGGGGCTCGG GGTCCGCTAG
 
Protein sequence
MQTEQTDILI SGGGVAGLSA AAAFGSAGFQ VIVVDPAPPV TEGAADGADM RTTAFLQPSR 
EVLEKAGLWA RLAPFAAPLQ VMQIIDAGGT EPVARVQKAF NARDISDDPF GWNLQNWLLR
REMVARLEEL PNVTFRPGVG TADVLARERE ARVRLTDGTM VSARLLIAAD GRNSPVRNAL
GIGVRTTRYG QKALAFAVTH PIPHDNVSTE IHRSGGPFTL VPLPDLEGQP RSAIVWMERG
PEALRLASCD VAEFEAEMTA RSTGLLGPLK LVSRRSVWPI ISQMAERLTG PRTALIAEAA
HVVPPIGAQG LNMSLADVRV LLELAEAAPD TLGSPEMLQA YARKRAPDVR TRITGIDLLN
RASMAGAQPL RDARAQGLKA LYGLAPVRKS LMQLGLGVR