| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2388 |
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| Symbol | |
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| ID | 5714044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2522050 |
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| End bp | 2523957 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268313 |
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| Product | glycosyl transferase |
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| Protein accession | YP_001533725 |
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| Protein GI | 159044931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.445397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTGA TTTCCCTCCA ACCCACCCGC GATACGGGTG ACGGTCTTCT TGCGCCGGTG
CCGCGCAAGC CAGCGCCGCG CCCGGAGCGG GAGTTGCTGG CCGATCTGCT GGTGCGGCGG
GGGGACATCT CGCCGGCCGA GCGGTTGCAG GCCGTGCACA TGGCACGGCT GCAGGGACGG
CGCCCGCTGG AAGTTCTGGA GGCCGAAGGC TGGCTGGCGC CCGAACTGCT GCTGGAAGCG
CGCTGCGAGA TGTACCGCGC GGGCCGCATC GACCCGGAGC AGGCGCCCGC CGATCCCGAT
CTGATCGGCG CCTACGGGAT CGACTGGTGT CTCACCCACG GTATCCTGCC CTGGCGGCGG
TTGTCCGGGG CGACCGTGTA CCTGGTGGCC GAGCCGGAGG AATTCGCCGA TATCGCCGCG
ACCCTGCCAC CCGAAGCCGG GCAGCCGGTG CTGGCCGTGG CCGGTGCCGA TGCCATTGCC
GAGGCGATCC GCGCCGCCCA TGCCCCCCAC CTGATCGCCC GCGCCGAGAC CGCCCTGCCC
GGACGCTGGA GCTGCCGCGG CTTCCGGCCA CTCTCGGCGA TGATGGGGCT TGTGTGCCTG
TACCTGGCCA CCGCCGCCCT GGTTCTGATC CCGGGGCTTG TGACCAGCGC GCTTATGTGG
ATCACGCTCG CGGTGCTGGC GATCACCATG GGCTTCAAAC TGATGCTCGC GGTCGCCTGC
CTGAGCGCGC GCCCCCCGCC GCAACCGCCC CCGGAGCGGA ACAAGACCAG ACCGCCCCTG
CCTGCCATGA GCATCCTCGT GCCTCTGTTG CGGGAAAGCG AGGTGGCGGA AAAACTGCTG
AACAATCTCG ACCGGCTCCG CTACCCCCGT GCGTTGCTGG ATGTTCTGTT CGTGGTCGAG
GCCGAGGATG ACGTGACCAA GAACGCCCTG TCGCAGCTGC GCCTGCCGCA GGGGTTCCGC
ATGCTGGAGG TGCCCCGCGG GACGGTGCAG ACCAAGCCGC GGGCCTTGAA TTTCGCGCTG
CCCTTCTGCC GCGGCGAGAT CGTGGGCATC TACGACGCAG AGGACCGGCC CGACCCGGAC
CAGCTGCTGA AGGTGGCCGA AGGCTTCCGC CACGCCGCGC CGGAGGTGGC CTGCCTGCAG
GGGCGGCTCG ACTTCTTCAA CACCCGGTTC AACCTGATCG CGCGGTGCTT TACCGCCGAA
TACGCCGGCT GGTTCGGACT GTTCCTGCAG GGGCTCGACC GGCTGGGCCT GCCGATCCCA
CTGGGGGGTA CGACCCTGTT CCTGCGCCGC AAGGTTCTGG AGGAGGTCGG GCCCTGGGAC
GCCCATAACG TGACCGAGGA CGCGGATCTC GGCATGCGGC TCTACCGCCA CGGCTACCGG
GTCAGCCTGA TCGACACAGT CACCCAGGAA GAGGCCAACG TGCGCATCTG GCCCTGGATC
AAGCAGCGCT CGCGCTGGAT CAAGGGCTAC ATGGCGACCT ATGCGGTGCA TATGCGCAGC
CCCCGCGCAT TGTGGCGGGC GCTGGGGCCG GGCGGGTTCG CAGCCCTGCA ATGCCTGTTT
CTCGGCTCGA TCCTGAGTGC GCTGACCATG CCGCTGCTGC TGTGGCTTTG GCTCGGGCAT
CTGGGCGCCC CGATCGTGCC CAACGCCGTG CTGGCCACTC TGCCACCGGC CCATGTGCTC
GGCCCGGTGA TGCTGGGGAT CGAGGCGGTG AACCTGGCGC TCTGGGCCGC CGGCGTGCGG
GCGGCCCGGC ACCGCCACCT GTGGCCGATG CTGCCGCTGC TGCATGTCTA TTTCCTGATG
TCGAGCATCG CCGCGCTCAA GGCGCTGGTC GAGCTGCTCT ACAAGCCGTT CTACTGGGAC
AAGACCGACC ACGGGATCGC GATGGACGTA CCCGAGCCGC CCGCCTGA
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| Protein sequence | MSVISLQPTR DTGDGLLAPV PRKPAPRPER ELLADLLVRR GDISPAERLQ AVHMARLQGR
RPLEVLEAEG WLAPELLLEA RCEMYRAGRI DPEQAPADPD LIGAYGIDWC LTHGILPWRR
LSGATVYLVA EPEEFADIAA TLPPEAGQPV LAVAGADAIA EAIRAAHAPH LIARAETALP
GRWSCRGFRP LSAMMGLVCL YLATAALVLI PGLVTSALMW ITLAVLAITM GFKLMLAVAC
LSARPPPQPP PERNKTRPPL PAMSILVPLL RESEVAEKLL NNLDRLRYPR ALLDVLFVVE
AEDDVTKNAL SQLRLPQGFR MLEVPRGTVQ TKPRALNFAL PFCRGEIVGI YDAEDRPDPD
QLLKVAEGFR HAAPEVACLQ GRLDFFNTRF NLIARCFTAE YAGWFGLFLQ GLDRLGLPIP
LGGTTLFLRR KVLEEVGPWD AHNVTEDADL GMRLYRHGYR VSLIDTVTQE EANVRIWPWI
KQRSRWIKGY MATYAVHMRS PRALWRALGP GGFAALQCLF LGSILSALTM PLLLWLWLGH
LGAPIVPNAV LATLPPAHVL GPVMLGIEAV NLALWAAGVR AARHRHLWPM LPLLHVYFLM
SSIAALKALV ELLYKPFYWD KTDHGIAMDV PEPPA
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