Gene Dshi_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2384 
Symbol 
ID5714040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2518819 
End bp2519340 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID641268309 
Producthypothetical protein 
Protein accessionYP_001533721 
Protein GI159044927 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.426403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTG AGTGGATCAC CACGTCGCAG CAGGCTCCGG AGAAATCCGG GGCCTGTTTG 
ACGGAGCAGC GGCTGTATCT CTGGCCGCAC AAGTCGCTGA CGGCCAAGGG GTTCGTCGCG
TTCATGACGA TCACCGCGCT GGCGCTGTCC CTGCCCCTCG TCGCGGTGCT GGGGACGGGG
GTGCTCTGGG GTCTCTTGCC CTTCATGCTG CTGTCGCTGG GCGGGGTGTG GTACGGCATT
CGCCGCAACC AGCGGGACAT GAGCCTGCAC GAGGTGCTGG TGCTGGCCGA GGACCGGATC
GCCCTGACCC GGCACAACCC GCACCGTGCC GCGCAACACT GGGAAGCCAA CCCCTACTGG
GTGGAGCTGC GCCTGCACCC CAAGGAGGGG CCGGTGGAAA ACTACATCAC CCTGCGCGGC
TCCGACCGGG AGGTGGAACT GGGCGCGTTC CTGTCCCCGG AGGAACGTCT GGACCTGCAT
GCGGACCTGC AGGACCGGCT CAACCGGATG CGGCGCCCCT GA
 
Protein sequence
MPLEWITTSQ QAPEKSGACL TEQRLYLWPH KSLTAKGFVA FMTITALALS LPLVAVLGTG 
VLWGLLPFML LSLGGVWYGI RRNQRDMSLH EVLVLAEDRI ALTRHNPHRA AQHWEANPYW
VELRLHPKEG PVENYITLRG SDREVELGAF LSPEERLDLH ADLQDRLNRM RRP