Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2384 |
Symbol | |
ID | 5714040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2518819 |
End bp | 2519340 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641268309 |
Product | hypothetical protein |
Protein accession | YP_001533721 |
Protein GI | 159044927 |
COG category | [S] Function unknown |
COG ID | [COG5488] Integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.426403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTTG AGTGGATCAC CACGTCGCAG CAGGCTCCGG AGAAATCCGG GGCCTGTTTG ACGGAGCAGC GGCTGTATCT CTGGCCGCAC AAGTCGCTGA CGGCCAAGGG GTTCGTCGCG TTCATGACGA TCACCGCGCT GGCGCTGTCC CTGCCCCTCG TCGCGGTGCT GGGGACGGGG GTGCTCTGGG GTCTCTTGCC CTTCATGCTG CTGTCGCTGG GCGGGGTGTG GTACGGCATT CGCCGCAACC AGCGGGACAT GAGCCTGCAC GAGGTGCTGG TGCTGGCCGA GGACCGGATC GCCCTGACCC GGCACAACCC GCACCGTGCC GCGCAACACT GGGAAGCCAA CCCCTACTGG GTGGAGCTGC GCCTGCACCC CAAGGAGGGG CCGGTGGAAA ACTACATCAC CCTGCGCGGC TCCGACCGGG AGGTGGAACT GGGCGCGTTC CTGTCCCCGG AGGAACGTCT GGACCTGCAT GCGGACCTGC AGGACCGGCT CAACCGGATG CGGCGCCCCT GA
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Protein sequence | MPLEWITTSQ QAPEKSGACL TEQRLYLWPH KSLTAKGFVA FMTITALALS LPLVAVLGTG VLWGLLPFML LSLGGVWYGI RRNQRDMSLH EVLVLAEDRI ALTRHNPHRA AQHWEANPYW VELRLHPKEG PVENYITLRG SDREVELGAF LSPEERLDLH ADLQDRLNRM RRP
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