| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2381 |
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| Symbol | lipB |
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| ID | 5714037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2515483 |
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| End bp | 2516145 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268306 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001533718 |
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| Protein GI | 159044924 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.735279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTGGA TCATTTCCGA TGGGCTGGTG CCCTACGAGG ACGCGCTCGC CACCATGGAA
GCGCGTGTCG CCGCCATTTC CGAGGGCCGC GCGCCCGAGA TGATCTGGCT GTTGGAGCAT
CCGCCGCTCT ACACCGCCGG CACCTCCGCC GACCCCGCCG ACCTGACCGA CCCGGACCGC
TTCCCGGTCC ACACCGCCCG GCGCGGCGGG CAGTACACTT ACCACGGGCC GGGCCAGCGG
GTGGTCTATG TCATGCTCGA TCTGGGCAAA CGCGGCCGCG ACGTGCGCCA GTTCGTCTGC
CGGATGGAGG CCTGGGTGAT CGCCACCCTG GCCGAGTTCA ACGTCACCGG CGAACGCCGC
GAAGGCCGCG TGGGCGTCTG GGTGCAACGG CAGGACAAAC CGCGCACTGC CGCCGGGCAG
CTCCAGGAGG ACAAGATCGC CGCTATCGGC GTGCGCCTGC GCAAATGGGT GAGCTTTCAC
GGTCTGTCGA TCAATGTGGA GCCCGATCTC GACCATTTCT CCGGCATCGT GCCCTGCGGC
ATCACCGAAC ACGGGGTCAC CAGCCTGGTC GATCTCGGCC TGCCGGTGAC CATGGCGGAT
GTGGACGTGG CCCTGCGCAA ATGCTTCGAA GAGACCTTCG GCCCCCTGCC GGTGGAGGCC
TGA
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| Protein sequence | MDWIISDGLV PYEDALATME ARVAAISEGR APEMIWLLEH PPLYTAGTSA DPADLTDPDR
FPVHTARRGG QYTYHGPGQR VVYVMLDLGK RGRDVRQFVC RMEAWVIATL AEFNVTGERR
EGRVGVWVQR QDKPRTAAGQ LQEDKIAAIG VRLRKWVSFH GLSINVEPDL DHFSGIVPCG
ITEHGVTSLV DLGLPVTMAD VDVALRKCFE ETFGPLPVEA
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