| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2380 |
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| Symbol | |
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| ID | 5714035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2514344 |
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| End bp | 2515117 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268304 |
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| Product | ABC transporter |
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| Protein accession | YP_001533717 |
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| Protein GI | 159044923 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.83089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.615068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCACCAGCCC CCCTCCGATG ATCGAGTTGC GCGGCGTCTC CAAGGCGTTC
GGGCCCAAGG AGGTTCTGCG CGGCGTGGAT CTCGTGATCC CCAAGGGCGA GAGCATGGTG
ATCATCGGCG GCTCGGGCAC GGGCAAATCG GTGATGCTCA AGAGCGTGCT GGGCCTGATC
TCGCCCGATG CGGGGCAAAT CCTGGTGGAC GGCAAGGATG TCGAGAAGGT GGAGCGCGAT
GCCTTCCTCG CCCGCTTCGG GATGCTGTTC CAGGGCGGTG CGCTCTTCGA CAGCCTGCCG
GTCTGGCAGA ATGTCTCGTT CCGCCTGCTG CGCGGGGCGC TGAAACGCCC GCGCGCCGAG
GCCCGCGACA TCGCCATCGA GAAGCTGCGC CGCGTGGGCC TGACCCCGGA CGTGGCCGAC
CAATTCCCGG CCGAGCTGTC GGGCGGCATG CAGAAACGCG TGGGCCTCGC CCGCGCCATC
GCCGCCGAGC CCGAGATCAT CTTCTTCGAC GAGCCCACGA CCGGGCTCGA CCCGATCATG
TCGGGCGTGA TCAACGACCT GATCCGCGAG ATCGTGGTCG AGATGGGCGC CACCGCCATG
ACCATCACCC ATGACATGAC CAGCGTGCGC GCCATCGCCG ACGACGTGGC CATGCTGCAC
GGGGGCAAGA TCCGCTGGAC CGGCCCGGTC TCGGACATGG ATCACAGCGG CGATCCCTAC
CTCACCCAAT TCATCAGCGG CTCCGCCGAT GGCCCCATAG AAGCGGTGCG ATAG
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| Protein sequence | MTDTTSPPPM IELRGVSKAF GPKEVLRGVD LVIPKGESMV IIGGSGTGKS VMLKSVLGLI
SPDAGQILVD GKDVEKVERD AFLARFGMLF QGGALFDSLP VWQNVSFRLL RGALKRPRAE
ARDIAIEKLR RVGLTPDVAD QFPAELSGGM QKRVGLARAI AAEPEIIFFD EPTTGLDPIM
SGVINDLIRE IVVEMGATAM TITHDMTSVR AIADDVAMLH GGKIRWTGPV SDMDHSGDPY
LTQFISGSAD GPIEAVR
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