Gene Dshi_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2360 
SymbolureG 
ID5714015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2495217 
End bp2495825 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID641268284 
Producturease accessory protein 
Protein accessionYP_001533697 
Protein GI159044903 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB
[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.695138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC ATGGCCCCCT GCGCATTGGG ATCGGCGGAC CGGTCGGTGC GGGCAAGACG 
ACACTGACCG AAAGGCTCTG TGCTGCGTTG CGCGACGACT ACTCCGTGGC GGTGATCACC
AACGACATCT ACACCTCGGA GGATGCCGAG TACTTGATGC GCGCGCAGGC CCTGCCGCTG
GAGCGGATCC GCGGGGTGGA AACCGGGGGC TGTCCGCACA CGGCGATCCG GGAGGATGCC
TCGATCAATC TCGCCGCCGT GGCCGACCTG CGGGCGAGTT TCGCGGATCT CGACGTGATC
CTGATCGAGA GCGGAGGCGA CAACCTCGCC GCAACCTTCA GCCCGGAACT CGCGGACCTG
ACGATCTACG TGATCGACAC GGCGGCGGGC CAGGACATCC CGCGCAAGAA GGGGCCGGGG
CTGGCCCGGT CCGACCTGCT GGTGATCAAC AAGACCGATC TGGCGCCCCA TGTGGATGTG
GATCTCGCAC TCCTGGAGTC CGATGCCCGC ACGGCGCGCG GCGCGCGTCC TTTCGTGATG
GCGGCCCTGA AATCGGGACA GGGGGTTGCC CAGATTGTTG CGTTTCTGGA ACGTGAGGGC
GGGCTCTGA
 
Protein sequence
MSEHGPLRIG IGGPVGAGKT TLTERLCAAL RDDYSVAVIT NDIYTSEDAE YLMRAQALPL 
ERIRGVETGG CPHTAIREDA SINLAAVADL RASFADLDVI LIESGGDNLA ATFSPELADL
TIYVIDTAAG QDIPRKKGPG LARSDLLVIN KTDLAPHVDV DLALLESDAR TARGARPFVM
AALKSGQGVA QIVAFLEREG GL