| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2354 |
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| Symbol | |
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| ID | 5714009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2487671 |
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| End bp | 2488822 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268278 |
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| Product | MFS transporter |
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| Protein accession | YP_001533691 |
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| Protein GI | 159044897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.632575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCC GTCTTTATTA CCTGACCCTC GGCAACGTGA TGATCGGCAC CGGCACCATG
GTGGTGTCGG GCATCCTCGA CCCGATCGCC GCCGATCTCG CGATCAGCGT CTCTGCCGCG
GGCCAGGTCA CGACCGTTTA CGCCCTCGCC TTCGCGCTCG GAGCCCCCGT CGCCGCCGCC
TTTACCGGCC GGTTCGACCG GTCGCGGGTG CTGGCCCTGT CGCTTCTGGT CTTCGCCGCC
GCCAGCCTGC TCAGCGCGGT GGCGCCGAAT TACACGACGT TGCTGATTGC GCGGGGGCTG
GGCGGGCTGG CCGCCGCGAC CTTCTCGCCA ACGGCCGTGG CCGTGGCCGC CTCGCTTGTG
CCCCCGGCGG AACGGGGCCG CGCCATCGCC CTCGTTTTCG GCGGGATGAC CATCGCCAGC
GTGCTGGGCG TGCCCCTCGG CACCTGGATC GGGCTGAATT TCGGCTGGCG CATCCTGCTG
GCCGGGCTCG GGGTGCTCAG CCTCGGCGCG GTGATCGCCC TGTGGCGCGG GGTGCCCGGT
GGGCTCTTCC TGCCCGCGGC CACGCTGGCC CGCTGGGACG AGGCCCTGCG CCTGCCCATC
ATCCGCGCGC TGCTTGGCGT GACGCTGTTC CAGATCGGCG GGAGCTTCGT ACTCTTTGCC
TTCTTCGGCC CCTATCTCGG CACGGTCACG GGGGTCGGCA CGGACGGGAT CGCGAGCTTG
CTGTTTCTCT TCGGGCTCGC CAGCCTGATC GGCAATTTCG CCGCCGGATG GGCCGTGGAC
CGGGTGGGCG CAGGCCCGGT GGCCCATGGC GCGATCGCGT TGACGGCGCT GAGCATGGTC
GCGCTTCTTG GCACCGCGGG GGCGCCGGTG CTGGCGGGTC TGGCGATCAT CCTGTGGGGC
AGTGCCGTGT TCGGCATCAA CACGGCGCAG CAGGCCCGCC TCGTTGACGC CGCGCCGGGG
CTGGCCACGG TCGTGCTGCC CGCCAATTCC TCGATTCTCT TTGCAGGACA GGCGCTGGGG
GCCGCGCTCG GTGGCGCGGT GCTGGCCATG GGCGGGCTCG CGGCCTTGCC GCTGGTGGGC
GCGCTGGTGG TGGGCATCGC CCTCGTTCTG TCCCTGCGTG CCATGCGTCA GACCGGGCGC
GCGCCGGTTT GA
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| Protein sequence | MDARLYYLTL GNVMIGTGTM VVSGILDPIA ADLAISVSAA GQVTTVYALA FALGAPVAAA
FTGRFDRSRV LALSLLVFAA ASLLSAVAPN YTTLLIARGL GGLAAATFSP TAVAVAASLV
PPAERGRAIA LVFGGMTIAS VLGVPLGTWI GLNFGWRILL AGLGVLSLGA VIALWRGVPG
GLFLPAATLA RWDEALRLPI IRALLGVTLF QIGGSFVLFA FFGPYLGTVT GVGTDGIASL
LFLFGLASLI GNFAAGWAVD RVGAGPVAHG AIALTALSMV ALLGTAGAPV LAGLAIILWG
SAVFGINTAQ QARLVDAAPG LATVVLPANS SILFAGQALG AALGGAVLAM GGLAALPLVG
ALVVGIALVL SLRAMRQTGR APV
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