Gene Dshi_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2351 
Symbol 
ID5714006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2483895 
End bp2484884 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID641268275 
Producthypothetical protein 
Protein accessionYP_001533688 
Protein GI159044894 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.92954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.47129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAT CGCACGATCA GATGCCCGAG CAGGCACTGG CCTGGCACCG GCAGGGCAAG 
GGTGCCGTGA TCGCCACGGT GGTGGAGACC TGGGGCTCCG CGCCGCGCCC CATCGGGAGC
CAGCTGGTGA TCTCGGGGGA GGCTGAATTG GCCGGGTCGG TCTCGGGCGG CTGTGTCGAA
GGTGCGGTGG TGGCCGAGGC CCTCGACGCC ATCGAGAGCG GCAAGGCCAG TTCCATGACC
TTCGGGGTCA GCGACGACGA GGCCTTTGCC GTCGGGCTCG CCTGTGGTGG GCAGATTCGC
GTGATCGTCG AACCGGTGGG GCCACATGTT TCCGAGGACA TGCTGGCCGA CCTGGTCGCG
GCCCGCGCCG CCCGGGCCCC GGTCGCGCTG GCGGTGAACC CGGACACGTG GGAGCGACGC
CTTGTCCGCC CGGACACCGA TGATCCGCTG TGCCCGGCGC TGATGTCGCG GGCACGGGCG
GACAAGTCCG GTTTCGAAGG CGACTGGTTT CTCGGGCTGC ATAATCCGCC CCTGCGCATG
GTGGTGGTGG GGGCCGTACA TATCGCCCAG CCCTTGCTGG CCATGGCGCG GCTGGCGGGG
TATGATCCGG TCCTCGTCGA TCCGCGGGCG GCCTTCGGCT CGGAGGCGCG CTTTCCCGGC
GAGACGATCC TCGACGAATG GCCGGATGCC GCATTGAAGG CGCATGGGCT CGACGCGCGC
ACGGCGGTGG TCACCCTGAC CCATGATCCC AAGCTGGACG ATCCGGCCAT CGAGGTTGCG
CTTGGCGCGC CGTGTTTCTA CCTCGGCTGT CTCGGATCGA CGCGGACCCA CGCCAAACGG
GTCGCGCGCT TGCAGGAGGC CGGGTTCGAC GAGGCCGCGA TCGCGCGCAT CCACGCGCCC
GTGGGTCTCG ACATCGGGGC AAAATCGCCC GCCGAGATCG CCATATCGAT CATGGCCGAA
ATCACGGACC GGCTGCGGAA GGCGCCATGA
 
Protein sequence
MTISHDQMPE QALAWHRQGK GAVIATVVET WGSAPRPIGS QLVISGEAEL AGSVSGGCVE 
GAVVAEALDA IESGKASSMT FGVSDDEAFA VGLACGGQIR VIVEPVGPHV SEDMLADLVA
ARAARAPVAL AVNPDTWERR LVRPDTDDPL CPALMSRARA DKSGFEGDWF LGLHNPPLRM
VVVGAVHIAQ PLLAMARLAG YDPVLVDPRA AFGSEARFPG ETILDEWPDA ALKAHGLDAR
TAVVTLTHDP KLDDPAIEVA LGAPCFYLGC LGSTRTHAKR VARLQEAGFD EAAIARIHAP
VGLDIGAKSP AEIAISIMAE ITDRLRKAP