Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2344 |
Symbol | |
ID | 5713999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2477127 |
End bp | 2478569 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268268 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001533681 |
Protein GI | 159044887 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.165919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGT TCATTGCCCC GTATCTGAAG CGCTTGCAGG TCAGCTATGG CCAGAAGCTC TTTCTGCTGG CGACCATTCC ACTCGTGCTC GCGGTGGCCG CGATCTCGGT CGTGGTGGCC GACCAGGGCC GTCAACTGGC GGAGCGCGAG ATCTCAGGGC TGGAAACCCA GCTGATCGAG GCCAAGAAGC GCGAGCTGCG CAATTACATC CAGCTGGCCC GCACCGCGTT CTTTGCCGAA TACGGCCGCG CCGCCCCCGA TGACGAGGCC GCCAAGGAAC GGGTGACCCA GATCCTCGCC GCCATGCTCT ATGGGCGCGA CGGGTTCTTC TTCGTCTATC ATTATGACGG AACCAACCTC GTGAGCCCGC GCCAGACCGA GCTGATCAAC CGCAACTGGA CCGGCCGCAC CGACAGCAAC GGCGTCCCCG TGGTGGACGA GTTGGTCCGC ATCGCGCGCG CCGGGGCGGG GTATCACACC TATGACTGGG TCAAACCCTC CACGGGCGAA GAGGCGCGGA TGATCACCTA CGTGGTCGGC CTGCAAGACT GGCAATGGGC GCTGGGGACC GGCATTTTCA TCGACGACGT GCTGACGCAC GTGGCCGCGG CCCGCGCCGC GACCGAGTCC CGCATCGCGC AGACCTTCTT CTGGATCGGG GCGATCACGC TGGCGGCCCT GCTGGCGGTG TTTGCCTCCG GTTTGCTGAT CAACATCCGC GAGCGGCGGC TGGCAGACGC CAAACTCAAG GCGCTGACCC AGCGCGTCCT CGACACCCAG GAGGAAGAGC GCGGCCGCGT GGCCCGCGAG TTGCATGACA GCATCAGCCA ACTTCTCGTG GGCATCCGCT ACGCGCTGGA ACTGGCCCGA AGGCGGGTCC AGACCGGCGA CGCGCGCGCC CAGGAGAATA TCGAGAAGGG CATCGATGGG CTGAACGGCG CCATCCAGGA GGTCCGCCGC ATCAGTCGCG ACCTGCGCCC GGGACAGCTC GACGATCTTG GCCTCGGCCC TGCGATCCAA GACCTGGCCG AGGAGTTCAC CAAGCGCACC GGCATCCGCG CGGAAATGAA AACGGTCGTG TTCCGGAATC GCCTCGACCC GGAGGCCAAG ATCGCGCTCT ACCGTATCGC CCAGGAGGCC CTGACAAATA TCGAACGTCA CGCCCAGGCC ACCGAAGTGC ATCTGGACCT CTTCGGACAC CAGACCGGCG CGACCCTGCG GGTGGCCGAC AACGGGCGCG GCCTGGCCAA TGTCTCCCGC GGCGCGGGCG GGCTCGGCCT GCGCAACATG CAGGAGCGGG TCGAACAGCT CGACGGCACG CTGCAGGTTT TCTCCTCGGA GGCTGGCACC CGAATTGACG CCACCGTGCC ACTCAGTCAC ATCCTGCCCC CAGAACCGGC CGCCCGCAGC ACCGCGGCCC CCGTCCGAAA GGTCCGCGCA TGA
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Protein sequence | MARFIAPYLK RLQVSYGQKL FLLATIPLVL AVAAISVVVA DQGRQLAERE ISGLETQLIE AKKRELRNYI QLARTAFFAE YGRAAPDDEA AKERVTQILA AMLYGRDGFF FVYHYDGTNL VSPRQTELIN RNWTGRTDSN GVPVVDELVR IARAGAGYHT YDWVKPSTGE EARMITYVVG LQDWQWALGT GIFIDDVLTH VAAARAATES RIAQTFFWIG AITLAALLAV FASGLLINIR ERRLADAKLK ALTQRVLDTQ EEERGRVARE LHDSISQLLV GIRYALELAR RRVQTGDARA QENIEKGIDG LNGAIQEVRR ISRDLRPGQL DDLGLGPAIQ DLAEEFTKRT GIRAEMKTVV FRNRLDPEAK IALYRIAQEA LTNIERHAQA TEVHLDLFGH QTGATLRVAD NGRGLANVSR GAGGLGLRNM QERVEQLDGT LQVFSSEAGT RIDATVPLSH ILPPEPAARS TAAPVRKVRA
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