Gene Dshi_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2338 
Symbol 
ID5713993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2467216 
End bp2468406 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID641268262 
Producthypothetical protein 
Protein accessionYP_001533675 
Protein GI159044881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0451029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.318955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCA TGACATCCAC GGAACAGGCG CCAGAGGTCC GGCGCCGCAA GGTGTTCTAC 
CTGCCCGGGT ATGACCCGTT TCCGCCCCGG CGATACCGCG AGATGTATCG CCGCGAGGGC
CGCAAGCAGG CCGAGCTGTC GGGCTATGGC CTGAAGGTCG CGGGCCTGCC CGGGGGGACC
GCCTGGCAGG TGGACTTGCG CGACGGTGCG CGAGAGGTCG TGACGCAGAT CGAGGTGCTG
GTCTGGTCCG ATCTGGTGCA GGCGTCCATG ACGGGCAATG TGCTGCGGTC CTACGCGGCG
CTGGTGCGAA CCGCGTGGAT CTATCTTGCC AGCGGGGCCC TCTGGCGGTT GACGCGGTTG
CGCAAGGGGC CGGTGCTGGC CGCGCTCTAT CCGGTGGTGG CCTTGCTGGC GCAGCTGCTG
CTGGCGCTGG GGGCGGGGGT GCTGTGTCTG CAGCTGGTCC CGGTGCCATG GCTGGATCTT
TTGCTGGCGG TCGGGGTCTT CGCCCTCGTG CTGGAGGCCG GGTACCGGGC GGATCGCTGG
CTCTATGCCC ATTACCTGAT GCGGGACTAT GCCTATGCGG CGGGGCTGGG CGGGGCGTAT
CCGCCGGAGT TGCGCGCCCG GTTGTCGGGG TTCGCGGACC GTGTGGCCGA GGCGGCGCGC
GGAGAGGTAG ACGAAGTGCT GCTGGTGGGC CATTCCTCGG GCGCGTATCT CGGGGTGACG
GTGTTGGCAG AACTGCTGCG TGCCGGGCGC CTGGAGAGCG GCGTGACGGT CGGGTTTCTC
AGCCTCGGTC ACGTCACGCC CATGGTGTCG GCCCTGCCGC AGGCGACGGA ATTGCGCGGC
GATCTGGCGG TACTGGGCCA CCAGTCCCGG GTTTTCTGGC TGGATGTGAC TGCGCCCGGC
GATGGCTGCG CCTTCGCGCT GTGCGATCCG GTGGCCGTGA GCGGCGTGGC ACGCGCAGAC
CAGACCGGGC CGCGCATCAT CTCGGCGCGT TTCAGCGAGA CGCTCGCGCC GGAAACCTGG
GCAAAGCTGC GCTGGCGCTT CTATCGGCTG CATTTCCAGT ATCTGCATGC GTTCGACCGG
CCCGGGGATT ACGACTATTT CCAGATCACG GCGGGGCCGC TGCGGCTCAA GGACCGGTTC
GAGGCGCGGG CCCCTTCGCC CAGCGTGCTG CGCCGACGTG TCGTCGCATG A
 
Protein sequence
MRAMTSTEQA PEVRRRKVFY LPGYDPFPPR RYREMYRREG RKQAELSGYG LKVAGLPGGT 
AWQVDLRDGA REVVTQIEVL VWSDLVQASM TGNVLRSYAA LVRTAWIYLA SGALWRLTRL
RKGPVLAALY PVVALLAQLL LALGAGVLCL QLVPVPWLDL LLAVGVFALV LEAGYRADRW
LYAHYLMRDY AYAAGLGGAY PPELRARLSG FADRVAEAAR GEVDEVLLVG HSSGAYLGVT
VLAELLRAGR LESGVTVGFL SLGHVTPMVS ALPQATELRG DLAVLGHQSR VFWLDVTAPG
DGCAFALCDP VAVSGVARAD QTGPRIISAR FSETLAPETW AKLRWRFYRL HFQYLHAFDR
PGDYDYFQIT AGPLRLKDRF EARAPSPSVL RRRVVA