| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2334 |
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| Symbol | fumC |
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| ID | 5713989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2463610 |
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| End bp | 2465007 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268258 |
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| Product | fumarate hydratase |
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| Protein accession | YP_001533671 |
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| Protein GI | 159044877 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00667023 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.148736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA CCGAGACCCG CACCGAAACC GACAGCTTCG GCCCGCTCGA GGTTCCTGCC
GACAAGTATT GGGGCGCGCA GACGCAGCGC TCGATCATGA ACTTCCCCAT CGGATGGGAA
AAGCAACCCG TGGCGATCGT TCGCGCCCTC GGCGTGATCA AGAAGGCCTG CGCCATGGCC
AACAAGAAAA GCGGCAAGCT CGACGCCCGC CTGGCCGATG CGATCATCCA GGCCGCGGGC
GAGGTGATCG ACGGCAAGTT CGACGACAAC TTCCCGCTGG TGGTCTGGCA AACCGGCTCC
GGCACCCAGT CCAACATGAA CTCCAACGAG GTGATCGCCA ACCGCGCGAT CGAGATCCTG
GGCGGCGTGA TCGGCTCCAA GGACCCGGTG CATCCGAACG ATCACTGCAA CATGGGTCAG
TCTTCCAACG ACACCTTCCC CACGGCCATG CATATCGCCG CCGCGACCAC CGCGCGCGAC
GTGCTGCTGC CCGGGCTCGT GAAACTCGCC GAGGGGCTGG AAGCCAAGGC CGAAGAGTTC
AAGGACATCA TCAAGATCGG CCGCACCCAT ACCCAGGATG CCACGCCCCT CACATTGGGC
CAGGAATTCT CCGGCTACGC CAAGCAGATC CGCAACGGCA TTGCCCGGAT CGAGATGGCC
CTGCCCGGCA TCTACGAACT GGCCCAAGGC GGCACCGCCG TGGGCACAGG GCTGAACACT
TCGCCGGGCT GGTCCGAAAC CGTGGCCGCC AACATGGCCG AGATCACCGG CCTTCCCTTC
GTGACCGCCC CCAACAAGTT CGAAGCGCTC GCCGCCCACG ACGCGATGGT CTTCATGTCC
GGCGCGATCA AGACGACCGC CATGGCGGCC TACAAGATCG CCAACGACAT GCGCTTTCTC
GGCTCCGGGC CACGGTCCGG ACTGGGCGAG CTGATCCTGC CGGAAAACGA GCCCGGCTCG
TCGATTATGC CGGGCAAGGT GAACCCGACC CAGGCCGAGG CGATGACCCA GGTCTGCGCC
CATATACTGG GCAATGACGC GGCCATTTCC TTTGCCGGCA GCCAGGGCCA TTTCGAGCTG
AACGTCTACA ACCCGATGAT GTCCTACAAC CTGCTGCAAT CCATGACCCT GCTGGGCGAT
GCCGCCGACA GCTTCACCGA GCGGATGCTG ATGGGCACAC GCGCCAATGA AGAACGGATC
GACAAGTTGA TGAAAGAAAG CCTGATGCTG GTCACGGCCC TCGCGCCCAC CATCGGCTAC
GACAACGCCA CCAAGGTGGC CAAGACCGCC CACAAGAACG GCACCACCCT GAAGGAAGAA
GCCATTGCGC TGGGGTTCGT TGACGCGGAA ACCTTCGACA AGGTCGTGCG CCCGGAGGAC
ATGATCGGCC CGAGGTAA
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| Protein sequence | MTMTETRTET DSFGPLEVPA DKYWGAQTQR SIMNFPIGWE KQPVAIVRAL GVIKKACAMA
NKKSGKLDAR LADAIIQAAG EVIDGKFDDN FPLVVWQTGS GTQSNMNSNE VIANRAIEIL
GGVIGSKDPV HPNDHCNMGQ SSNDTFPTAM HIAAATTARD VLLPGLVKLA EGLEAKAEEF
KDIIKIGRTH TQDATPLTLG QEFSGYAKQI RNGIARIEMA LPGIYELAQG GTAVGTGLNT
SPGWSETVAA NMAEITGLPF VTAPNKFEAL AAHDAMVFMS GAIKTTAMAA YKIANDMRFL
GSGPRSGLGE LILPENEPGS SIMPGKVNPT QAEAMTQVCA HILGNDAAIS FAGSQGHFEL
NVYNPMMSYN LLQSMTLLGD AADSFTERML MGTRANEERI DKLMKESLML VTALAPTIGY
DNATKVAKTA HKNGTTLKEE AIALGFVDAE TFDKVVRPED MIGPR
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