Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2332 |
Symbol | |
ID | 5713987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2461615 |
End bp | 2462868 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268256 |
Product | putative chromate transport protein |
Protein accession | YP_001533669 |
Protein GI | 159044875 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2059] Chromate transport protein ChrA |
TIGRFAM ID | [TIGR00937] chromate transporter, chromate ion transporter (CHR) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00115086 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.80205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCCC CCTCCCTGTC GGAGCTGACC CGCGTCTTCG GTCGCATCGG CCTTCTGTCC TTCGGCGGCC CTGCGGCCCA GATCGCGCTG ATGCAGGAAG AGCTGGTCGA GGACCGCGCC TGGCTGACGC GGCCGCAATT CCTCAACGCG CTGTCCTTTT GCATGCTCCT GCCCGGGCCG GAGGCGATGC AGCTGGCCAC CTATGCGGGC TGGAAGCTGC GGGGCACGCC GGGCGGGTTG ATCGCGGGGG GGCTCTTCGT GGTGCCGGGG GCCTGCGTGA TCTTCGCGCT CGCCTATGCC TACGCCGCAT TCGGCGATCT GCCCCTGGTG GACGGGGTGT TTCTGGGCAT TCAGGCGGCC GTGATCGTCC TGGTGTTCAA GGCGCTCCTG GGTCTTGCGC GCAAGACGCT GACCTCGCGG GACCGATGGA TGCTGGCAGC GCTCAGCTTC ACGGCGCTCT TCGTGTTCGG CGTGCCCTTC CCTGCGATCA TCGCCGCGGC GGCGCTTTAC GGTGCGTTGA GCGCCCGCGG GCCCGTGACG ACGTCCGCGG AGAGCGAGGC CCTACCCCAC CCTGCCATCG GCACGATTCT GACCTGGTTG ACTGCTTGGC TCGCGCCCAT CGCGGTGCTC TGGGCCAGCG GTGCCGACCT GCTCAGCCAG ATCGCCCTCT TTTTCGCCAA GCTCGCGGTG GTCACTTTCG GCGGGGCCTA TGCAGTGCTT GCCTACATGA CGCAAGAGGT CGTGCAGGAA CGGGGCTGGC TCACGCCCGA GCAGATGATC GACGCGCTGG GTCTGGCGGA GACGACGCCG GGGCCGCTGA TTCTGGTCAC ACAATTCGTG GGCTTTCTCG CAGGGTTCGC CGAAGGCGGG CTCGGACTGG CACTGATCGC CGGGCTAATC ACGCTGTGGG TGACTTTTGT GCCCTGTTTT TTGTGGATTT TCACCTTCGC ACCGTATGTG GAGTGGATCG CCACACGGCC CCGCCTGACC GGCGCTCTGC AGGGCATTAC CGCCGCTGTG GTGGGCGTGA TCCTGAACCT TGTGCTGTGG TTCGCGCTGC ATGTGCTGTT CGACAGTTTG CGCCCGGTGG CGGTGCCGGG TGTGGTGGCC GAGCTTCCGC TGCTGGCCTC GTGGAACGGG GCGGCCCTCG GCCTGACCCT GTTCGCGGCC TACCTGATGT TGCGCCTGAA GCTGGAATTC CCGGTTGTGC TTGCCTTTTG CGCCACCGCT GCGGGGGTCA TCACCCTGAT CTGA
|
Protein sequence | MTPPSLSELT RVFGRIGLLS FGGPAAQIAL MQEELVEDRA WLTRPQFLNA LSFCMLLPGP EAMQLATYAG WKLRGTPGGL IAGGLFVVPG ACVIFALAYA YAAFGDLPLV DGVFLGIQAA VIVLVFKALL GLARKTLTSR DRWMLAALSF TALFVFGVPF PAIIAAAALY GALSARGPVT TSAESEALPH PAIGTILTWL TAWLAPIAVL WASGADLLSQ IALFFAKLAV VTFGGAYAVL AYMTQEVVQE RGWLTPEQMI DALGLAETTP GPLILVTQFV GFLAGFAEGG LGLALIAGLI TLWVTFVPCF LWIFTFAPYV EWIATRPRLT GALQGITAAV VGVILNLVLW FALHVLFDSL RPVAVPGVVA ELPLLASWNG AALGLTLFAA YLMLRLKLEF PVVLAFCATA AGVITLI
|
| |