Gene Dshi_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2331 
Symbol 
ID5713986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2461236 
End bp2461580 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content67% 
IMG OID641268255 
Producthypothetical protein 
Protein accessionYP_001533668 
Protein GI159044874 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000141879 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.845556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG TGATATTCGA AGTCCATCCC GCCGAGGGCC GCAAGGACGC CTATCTCGCC 
ATGGCCGCGG AGATGCGCCC CCTTGTCGAG CAGATCAACG GGTTCCTGTC GGTCGAACGC
TTCGAGAGCC TGACAACCCC CGGCAAGCTC TTGTCGGTAT CGTTTTTCCG GGATGAAGCC
GCGCTGGATG AATGGCGCCG GCTGACGCAG CATCGGCGGG CGCAGACCGC GGGCCGCGCG
GGCATGTTCG CCGACTACCG GCTGCGCGTG GCCCATGTGC TGCGCGACTA CGGCATGACC
GACCGGGCCG AGGCCCCCGC CGACAGCGTG GCCCTGCACG GATGA
 
Protein sequence
MIAVIFEVHP AEGRKDAYLA MAAEMRPLVE QINGFLSVER FESLTTPGKL LSVSFFRDEA 
ALDEWRRLTQ HRRAQTAGRA GMFADYRLRV AHVLRDYGMT DRAEAPADSV ALHG