| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2317 |
|---|
| Symbol | cfa |
|---|
| ID | 5713972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2448130 |
|---|
| End bp | 2449374 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641268241 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001533654 |
|---|
| Protein GI | 159044860 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.175202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC TTACCGGAAC CAAAGGTGCC GCCGAACCCG TGTTGACGTC GCCCAAGGGG
CAGAAAGACC TGCCGCGCTA CTTCAAATCA GCTTTCGACA TCGCCTCCAA GATCGAACAC
GGACGGCTCG ATTTCGTGCT GGCGGACGGA CGCCGCTTTC GCGTCGAAGG GCCCAAACCC
GGTCCGGTGG CGGAACTGGC CATTCATAAC GACGACGTGT TCGCGCGGCT CGTTCGCGAG
GGGGAGCTTG GCTTCTGCGA TGCCTATCTC GACGGCTGGT GGAGCACGCC GGACCTGCAG
GGTTTCATGG ATCTGATCAC CGCCGATAAC GACGCGCTGT TCGACGGCTA TACCGGGTTT
GCACTGGTGC GGATTGTCGA GAAACTGCGC TTCTGGCTGC AATCCAACAG CAAGACCCAG
GCCAAGAAGA ACATCGCCGC CCATTATGAC CTGGGCAACG AGTTCTATGC GCTGTGGCTC
GACGACACGA TGACCTATTC CTCGGCCATG TTCGAGACCG GGCAGGAGAG CACCGAGGCC
GCGCAACGCC GCAAATACGC CTCGATGGTG GATGAAATGG GCGCCCAGCC CGGCGATCAT
GTGCTGGAGA TCGGCTGTGG CTGGGGCGGG TTCGCCGAAT ATGCCGCCAA GGAACGCGGG
CTCAAGGTTA CCGGCCTCAC CATCAGCCAG GCGCAATTCG ACTACGCCAC CGCCCGGATC
GCCAAGGCCG GGTTGTCGGA CCAGGTCGAG ATTAAGTTGC AGGATTACCG CGACGAGCAC
GGGCTTTATG ACGGCATCGC CTCCATCGAG ATGTTCGAGG CCGTGGGCGA GCGGTACTGG
CCTGTCTATT TCGACACGGT CCGCGAGCGG CTCCGGCCGG GCAAACATGC CACGCTGCAG
ATCATCACCG TCAAGGATTC GAAATTCGAA ACCTATCGCA AGAGTGTTGA TTTCATTCAG
AAATACATCT TCCCCGGCGG CATGCTCCCG GGTCCGAGCG TGCTGCGACA GCAGGCCCGC
CGCGCGGGGC TGGAGGTCAA GCGCTCCATC GAGTTCGGCG AAAGCTACAG CCAGACCCTG
CGCCGCTGGC ACGAGACCTT CAATGACCGC TGGGACGAGG TCGCCTCTCT CGGGTTCGAT
GACAGATTTC GCCGCATGTG GAACTTTTAT CTGACATCTT GTGCTGCCAC GTTCCACTAC
GGGAACTGCG ATGTCACGCA GATCACGGTG ACGAAACCGG GCTAG
|
|---|
| Protein sequence | MTLLTGTKGA AEPVLTSPKG QKDLPRYFKS AFDIASKIEH GRLDFVLADG RRFRVEGPKP
GPVAELAIHN DDVFARLVRE GELGFCDAYL DGWWSTPDLQ GFMDLITADN DALFDGYTGF
ALVRIVEKLR FWLQSNSKTQ AKKNIAAHYD LGNEFYALWL DDTMTYSSAM FETGQESTEA
AQRRKYASMV DEMGAQPGDH VLEIGCGWGG FAEYAAKERG LKVTGLTISQ AQFDYATARI
AKAGLSDQVE IKLQDYRDEH GLYDGIASIE MFEAVGERYW PVYFDTVRER LRPGKHATLQ
IITVKDSKFE TYRKSVDFIQ KYIFPGGMLP GPSVLRQQAR RAGLEVKRSI EFGESYSQTL
RRWHETFNDR WDEVASLGFD DRFRRMWNFY LTSCAATFHY GNCDVTQITV TKPG
|
|---|
| |