| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2315 |
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| Symbol | |
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| ID | 5713970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2446520 |
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| End bp | 2447656 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268239 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001533652 |
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| Protein GI | 159044858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TCTTCGTCTT CGGCACCCTG CGCGACCTGT CCCTTTTGGA AATCGTGCTC
GGCCAGTTGC CCGAGCGGCG CGAGGGCTGG TTGCTCGGCG CGCGCACCGT CTGCGCCGCG
GGCCATGATT TCCCGATCTC GATCCCCGCC GCACCGTCGG ACCGGTCCCC CGGTCTGCTG
CTCATCGGCC TGAGCGCAGA CGATATCGCC CGGCTCGATT TCTACGAGGA CGGCTTCGGC
TATCTGCGCC GGACGGCCAC CGTCACCTGC GCGGATGGAA CCTTGCGGCA AGCGCAGCTT
TACCGACCCA CCGACGACGC GCTGCGCCCC GGAGGTCCGT GGGACTTGTC CGCATGGCAG
GACCGACATG GCGCGGTCAC GCGGGAAACG GCGCTGGAGG CGATGTCCTA TTTCGGCACC
CTGACCTCGG CCGAGATGGC TGCCCTCTGG CCGGTGATGG CCGCCCGCGC GCAATCCCGG
CTGGCCGCGC GCACCCGACC CGCGCCTGTC CGCGACGACC TGCCGTCCCG CGACGCGGTG
GTCGTGGAGC GGACCGACAT CCCCTACAAC AAGTTCTTCC GCCTCGAAGA ACACCACTTG
CGCTTTCCCC ATTTCGACGG CGGGCTGAGC GATCCGGTCT CCCGTGTGGC CTTCGTGGCG
GTGGATGCGG TCACGGTCCT GCCTTACGAC CCGGTGCGCG ACCGGGTTCT CCTGGTCGAC
CAGTTCCGCA TCGGGCCCTA TGTGCGCGGC GATGCCCAAC CCTGGACATT GGAGCCCATC
GCAGGCCGTG TCGACGGGGG CGAAACCTGG GAAGAGACCG TCCACCGTGA AGCCCGTGAA
GAGGCGGGGC TGACCATGTG GCACCTGGAG CGGATCGGCA CCTATTACCC CTCCCCCGGG
GCGGTGACCG AATCCCTTGC CTCCTATGTT GGGCTGACCG ATCTGCCCGA TGATGCCGTG
GGCCTTTTTG GCGTCGATCA TGAGGCCGAA GACATCAAGA CCCGGATCGT GGGTTTCGAC
ACGCTCATGG CGATGACCCG CGACGGGCGC GTGCAGAACG GTCCGCTGAT GATCTCGGCC
CTCTGGCTGG CCGCCGAACG CGCCCGTCTG CGCACCCTGC CGCGCCCCGA CACTTGA
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| Protein sequence | MTDIFVFGTL RDLSLLEIVL GQLPERREGW LLGARTVCAA GHDFPISIPA APSDRSPGLL
LIGLSADDIA RLDFYEDGFG YLRRTATVTC ADGTLRQAQL YRPTDDALRP GGPWDLSAWQ
DRHGAVTRET ALEAMSYFGT LTSAEMAALW PVMAARAQSR LAARTRPAPV RDDLPSRDAV
VVERTDIPYN KFFRLEEHHL RFPHFDGGLS DPVSRVAFVA VDAVTVLPYD PVRDRVLLVD
QFRIGPYVRG DAQPWTLEPI AGRVDGGETW EETVHREARE EAGLTMWHLE RIGTYYPSPG
AVTESLASYV GLTDLPDDAV GLFGVDHEAE DIKTRIVGFD TLMAMTRDGR VQNGPLMISA
LWLAAERARL RTLPRPDT
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