Gene Dshi_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2314 
Symbol 
ID5713969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2445430 
End bp2446467 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID641268238 
Productputative cysteine synthase A 
Protein accessionYP_001533651 
Protein GI159044857 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCT ATCGTGACCT TGCGGAGGCC ATTGGCCACA CGCCGCTCAT CCGCCTGAAC 
GCGGCCAGCG AAGCGACCGG GTGCGAGATC CTTGGCAAGG CGGAATTCCT CAACCCCGGG
CAGTCGGTGA AGGACCGTGC CGCCCTCTAC ATCATCCGCG ATGCGGTGGC CCGCGGAACC
CTGAAGCCGG GCGGCACAAT TGTGGAAGGT ACCGCCGGGA ACACCGGTAT CGGGCTGGCA
CTTGTCGGGG CCTCGATGGG GTTCAAGACC GTCATCGTCA TCCCCGAAAC CCAGTCCGAA
GAGAAAAAGG ACATGCTGCG CCTGGCGGGC GCGGACCTCG TGCAAGTGCC CGCCGCGCCT
TACCGCAACC CCAACAATTA CGTGCGCTAC TCCGAACGGC TGGCCAAGCG GCTGGCCGAG
ACCGAGCCGC ACGGGGCGAT CTGGGCCAAC CAGTTCGACA ACGTCGCCAA CCGCCAGGCC
CATGTGGAAA CCACCGGCCC CGAAATCTGG GACCAGACCG GCGGCAAGGT CGACGGGTTC
ATTTGTGCCG CAGGCTCCGG CGGCACCGTG GCGGGGGTGG GCCTCGCGCT CCAGCCCAAG
GGCGTGAAGG TCGGCCTCGC GGACCCCGAC GGCGCGGCGC TCTACAACTT CTACACGCAG
GGCGAGCTGA AATCCGAAGG CTCCTCGATC TCCGAGGGGA TCGGACAGGG GCGCATCACC
GCCAATCTCG AAGGCTTCAC CCCGGATTTC GCATGCAACG TGCCCGACAG CGAGGCTTTG
CCGATCGTCT TCGACCTCTT GCGTCACGAA GGGATCTGCC TCGGCGGTTC CTCGGGCATC
AACATCGCCG GGGCCATCCG CATGGCGCGG CATATGGGGC CGGGCCACAC CATCGTAACG
ATCCTGTGCG ACTACGGCAC GCGCTACCAG TCCAAGCTCT TCAATCCCGA TTTCCTGCGC
AGCAAGGATC TGCCCGTGCC CGACTGGCTC GACGCAAACC CGCGCAGCCT GCCCGCGGTC
TTCGAGGAGG TTCCATGA
 
Protein sequence
MHSYRDLAEA IGHTPLIRLN AASEATGCEI LGKAEFLNPG QSVKDRAALY IIRDAVARGT 
LKPGGTIVEG TAGNTGIGLA LVGASMGFKT VIVIPETQSE EKKDMLRLAG ADLVQVPAAP
YRNPNNYVRY SERLAKRLAE TEPHGAIWAN QFDNVANRQA HVETTGPEIW DQTGGKVDGF
ICAAGSGGTV AGVGLALQPK GVKVGLADPD GAALYNFYTQ GELKSEGSSI SEGIGQGRIT
ANLEGFTPDF ACNVPDSEAL PIVFDLLRHE GICLGGSSGI NIAGAIRMAR HMGPGHTIVT
ILCDYGTRYQ SKLFNPDFLR SKDLPVPDWL DANPRSLPAV FEEVP