| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2303 |
|---|
| Symbol | |
|---|
| ID | 5713957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2433393 |
|---|
| End bp | 2434691 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641268226 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533640 |
|---|
| Protein GI | 159044846 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAG ATCCCAAGGG GGGCGTCTGC CGCAAACCCT TGGCAAAGGC TGCGAAATCA
TGGGATCGAA AGCGAAGTTC GACGGAAGGA AAGCGTGACG TGAGGACCAC AAGCGAACAG
ATGCGAGCCT GGACGGGACC TGCGGTGTTG TCCTACGGGT TCCGACCGTT CTTTTTGGCT
GCCGGCCTGT GGGCCGCCGC CGCGATGGTC GCCTGGATCG CCATGCTTTC CGGGCAGGAT
GTGCTGCCCA CTGCGTTCGA TCCTGTTTCG TGGCATGCCC ATGAGTTCCT GTTCGGGTAT
CTGGGGGCCG TGGTCGCGGG GTTCATGCTG ACCGCTGTGC CGAACTGGAC CGGGCGGCTT
CCCCTTGTGG GTTGGCCGCT GGCGGGACTG TTTGCGCTCT GGCTGGCGGG GCGCTTGGCG
GTATCGATTT CGGAGGTCCT TCCGGCCCTT GTGGTTGCCG CCGCCGATCT TTCCTTTGCT
GTCCTTCTCG CATTGGCCAT GACGCGCGAG ATCGTGGCGG GCCGTAACTG GCGCAACCTG
ACGATCCTGG CCCTTCTGGC CACGTTCATC CTGGCCAATG GCCTGTTTCA CTGGGAGGCG
GCCCGGGGAG GTAATGCGGC CGGTGGCTTT GGTCTGCGCC TGGGGCTGGC GGCCGGGTTG
ATGATGATCG CCGTGATCGG GGGACGGATC ATTCCGTCAT TCACCCGCAA CTGGTTGGTC
AAGCGGGGCG ATACGGTCCT TCCAGCGCCC CCCATGCAGG CGTTCGACAA ACTGACGCTT
CTTGTCTTGC TGGGCGCACT GCTGGCTTGG GTGGGCTGGC CGCTGCATGT TCTGACTGGT
GGGCTACTCG TCGCAGCAGG CTTGCTTCAT CTGGCGCGGC TGACCCGGTG GTCATGGCAG
CGCACGGCGT CCGAACCGTT GGTTTGGGTG CTGCATCTCG CGTACCTGTT CCTGCCGATG
GGGGCGGTCC TGCAAGGTCT GGCGACCCTC CGGCCGGAAC TCGTCGGCAC GGCACCGGCA
CAGCACGTTT GGATGGCGGG GTGTATCGGG CTGATGACCC TTGCGGTCAT GACACGGGCG
ACCTTGGGCC ACACCGGCCG GGCGCTCACA GCGGGCAGCG GCACGACGGC GATCTATCTT
CTGATCGTGG CAGCGGTCCT GTCGCGGGCG CTGGCGGGCG TCTGGCCGGC ATGGGCCAGC
ATGTTGCACG CGCTTTCGGC GGTGTTCTGG ATCGCGGCTT TCGGGGGTTT CTCGCTGCTC
TATGGCGGAT TGCTTCTGCG CCCCAAACCA GCCGCATAG
|
|---|
| Protein sequence | MAQDPKGGVC RKPLAKAAKS WDRKRSSTEG KRDVRTTSEQ MRAWTGPAVL SYGFRPFFLA
AGLWAAAAMV AWIAMLSGQD VLPTAFDPVS WHAHEFLFGY LGAVVAGFML TAVPNWTGRL
PLVGWPLAGL FALWLAGRLA VSISEVLPAL VVAAADLSFA VLLALAMTRE IVAGRNWRNL
TILALLATFI LANGLFHWEA ARGGNAAGGF GLRLGLAAGL MMIAVIGGRI IPSFTRNWLV
KRGDTVLPAP PMQAFDKLTL LVLLGALLAW VGWPLHVLTG GLLVAAGLLH LARLTRWSWQ
RTASEPLVWV LHLAYLFLPM GAVLQGLATL RPELVGTAPA QHVWMAGCIG LMTLAVMTRA
TLGHTGRALT AGSGTTAIYL LIVAAVLSRA LAGVWPAWAS MLHALSAVFW IAAFGGFSLL
YGGLLLRPKP AA
|
|---|
| |