| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2294 |
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| Symbol | |
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| ID | 5713948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2423982 |
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| End bp | 2426291 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268217 |
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| Product | PQQ dehydrogenase family protein |
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| Protein accession | YP_001533631 |
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| Protein GI | 159044837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAAGC TTTTCGGAGC CATTCTCGTC CTTGTCGGGG CCCTCATGTT CGTGCCCGGC
ATCTGGCTGA TCGCACTCGG CGGGTCGTGG TATTACAGCC TTGCGGGCGC AGGGCTCGCG
GCCGCGGGCT TTTACTACTG GAAGAAACAG CTCCTGGGGG CCTGGATTTT CGGGGCGGTA
TTCGCCGGCA CCGCGCTCTG GGCCGTCTGG GAAGTCGGGT TCGAGCTCTG GCCGCTGGTG
CCGCGCCTGG TCGCGCCCAT GGTGTTGGCC ATCCTCGCTG TCCTTCTGGT GCCATCCCTG
AACGAGGGGC GCGGACGCAC AGCCAGCCTC GCGGCGGCCG GGGTGCTTGC GCTGGGGATT
GCCGGGTTCT TCTGGGGCAT GGCCACGCCG CAGAACGTCA TCGCCAACAC CGACCCGGTC
CCGACCCGTG CGATCGCGGC GGAAAGCCCG AACTGGACCC ATTACGGGCG CACCCCGACC
GGCACGCGCT TTGCGCCGTT CGACCAGATC ACGCCCGAGA ATGTGGGCGA GCTGGAGGTC
GCCTGGACCT TCAACCACGG CGACGCGCCC TCCGGCACGG GCCAGGACCA GAACACGCCA
CTCTACGTGG ACGGGCTGGT CTATCACTGC TCGCCCAACA ACATCGTCAG CGCCATCGAC
GCGGTGACGG GCGCGCAGGT CTGGCAATAC GACCCCGAAG CGAGCTCCCC CCTGTGGCAG
CGGTGCCGGG GCGTGACCTA CTACGAACCG ACGCCGCGGG AAGGCGCCCC GGCGGACGGC
ACCTGCGCCG CGCGCATCGT GCTCAGTTCG GTCGACGCGC GGTTGATCCA GCTCGACGCG
CGGACCGGCG CGCTCTGCAC GACCTTCGGC GACGGTGGCG CGGTGGACCT GACGCGAAAC
ATGGGCGAGG TGCGGCCAGG ATTCTACTTC CCGACCTCCG CGCCCACGGT GATGGGCGAC
CGGATCATCC TCGGCGGCTG GGTCTGGGAC GGCATGGCCG TGGACGAACC CTCCGGCGTG
GTGCGCGCCT TCGATGGCCG CACGGGCGAG ATCGCCTGGG CGTGGGATAT CGGCAATCCG
GCCATCGACA CCGTGCCGCC CGAGGGCGAG ACCTATACCC GCGGCACGCC AAACGTCTGG
TCCACCCCGG CCTTCGACGC AGCACTCGGC CTCGTCTACC TGCCCACAGG TAACGCGCAG
CCCGATTTCT ACGGAAGCTC GCGCATCGAG GCGGCGAATG ACTGGAACTC CTCCATCGTC
GCGCTGGATG TCGAAACCGG CAAAGTGGTC TGGAGTTTCC AGACAACCTA CCGCGACATC
TGGGACTACG ATGTGCCGGC CCAGCCGATG CTCTACGACA TCACCACCGA GACCGGCGAG
GTCGTGCCCG CCCTGATCCA GGTGACCAAG CGCAGCCAGA CCTTCGTGCT GGACCGGCGC
GACGGTACCC CGATCGCAGA GGTGCGCGAC CTGCCTGTGC CCACGACCGG CGGGGTCGAG
CCCGACTACC TGTCGCCGGT GCAGCCCTAC TCCGTGGACA TGCCGGTCAT CGGGGCGGAG
CCCTTGACCG AGGCCCGGAT GTGGGGCGCC ACACCGCTCG ATCACCTTTA TTGCCGCATC
CGCTTCCGGC AGGCTTATTA CGTGGGGGAT TTCACGCCCA TGTCCGAACA GGGCACGCTG
ATCTGGCCGG GCTATTTCGG GGGCATGAAC TGGGGCACGG GCACAATAGA CGAGGCCCGC
GGCCTTTTGA TCGTGAACGA CACACGGGTT GCGCATCTGC TGCAACTGAT CCCACGTCAA
GAGGCTGATG CCCTGGGCGT CGAGGTGGTC GGCCCTCATG ACGGGCTGGC GCCCCAGGAC
GGGGCACCGT TCGGGGCGAT GCGGTCGAAC TTCTTCTCCT TCGTCGGCGT GCCCTGCCAG
GAGCCGCCCT ATGGCACGAT GACCGCCATC GACCTCGCGG ACCGGTCGAT CCTATGGCAG
CGGCCCGTCG GGACCATCGA GGAGACCGGG CCCTTCGGCA TCCGCACCGG CTGGCGCATG
CCCGTGGGCC TGCCGTTGGT GGGCGGGCCG ATCTCCACCG CGAGCGGCCT GACCTTCTAC
TCGGGCACGC AGGACTATTA CCTGCGGGCG TTCTCATCCG AGACCGGCGA AGAGTTGTGG
CGCGGGGCAC TCCCGCTCGG CTCGCAATCC ACGCCGATGT CCTATATCGG GCCAGATGGG
CGTCAGTATG TCGTTGTCAC CGTAGGCGGC CTGAACGATA TCATGGGACG CGGCGATATC
GTGATGGCCT TTGCCCTGCC AGAGGAGTGA
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| Protein sequence | MTKLFGAILV LVGALMFVPG IWLIALGGSW YYSLAGAGLA AAGFYYWKKQ LLGAWIFGAV
FAGTALWAVW EVGFELWPLV PRLVAPMVLA ILAVLLVPSL NEGRGRTASL AAAGVLALGI
AGFFWGMATP QNVIANTDPV PTRAIAAESP NWTHYGRTPT GTRFAPFDQI TPENVGELEV
AWTFNHGDAP SGTGQDQNTP LYVDGLVYHC SPNNIVSAID AVTGAQVWQY DPEASSPLWQ
RCRGVTYYEP TPREGAPADG TCAARIVLSS VDARLIQLDA RTGALCTTFG DGGAVDLTRN
MGEVRPGFYF PTSAPTVMGD RIILGGWVWD GMAVDEPSGV VRAFDGRTGE IAWAWDIGNP
AIDTVPPEGE TYTRGTPNVW STPAFDAALG LVYLPTGNAQ PDFYGSSRIE AANDWNSSIV
ALDVETGKVV WSFQTTYRDI WDYDVPAQPM LYDITTETGE VVPALIQVTK RSQTFVLDRR
DGTPIAEVRD LPVPTTGGVE PDYLSPVQPY SVDMPVIGAE PLTEARMWGA TPLDHLYCRI
RFRQAYYVGD FTPMSEQGTL IWPGYFGGMN WGTGTIDEAR GLLIVNDTRV AHLLQLIPRQ
EADALGVEVV GPHDGLAPQD GAPFGAMRSN FFSFVGVPCQ EPPYGTMTAI DLADRSILWQ
RPVGTIEETG PFGIRTGWRM PVGLPLVGGP ISTASGLTFY SGTQDYYLRA FSSETGEELW
RGALPLGSQS TPMSYIGPDG RQYVVVTVGG LNDIMGRGDI VMAFALPEE
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