Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2291 |
Symbol | |
ID | 5713945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2420989 |
End bp | 2421627 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641268214 |
Product | hypothetical protein |
Protein accession | YP_001533628 |
Protein GI | 159044834 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.954973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTCC CACGTATCGC CTGCGTCGTC TTCATAGCGA CGACCTTTGC CGCCACGACC GTCAGCGCCC AGTCGATGGA AGCCGTGCCA TTCACCTGTA ACGATGGGCG CAGCCTCGTC GCCGAATTCG GACAGGACAG CGTACGGGTC ACCATGGAGG TCACGCTTGA AGCGCAGCCT TCGGGCTCCG GGTTTGTCTA CTCGGGCACC CCCGGCACTT TGCGGGGGCA AGGCGACGAG GTCAGATGGC AAAGCACCGG CACCGATCCC GTGATCTGCA CCGCGGTGCC CGGAGGCGCA GCACTTGTGG GCGGTGTGTG GGAACTGGTT CAGGTTGGTG AAGCCGAGAT CGAGGAAACC GGGCATCACA CGATCGGCTT TCTGGCCGAT GGCGGCCTCG TGCTGCGCGC GGACTGCAAT CTCGGACGGG GGACCTGGGA GGCCGAGCCG GAGACGAACA GTGCGGGTGC GCTGAGCGTC GGACCGGTGG CCCTCACCCG CATGGCATGT GCCGCGGACC CTGTCCCACA AATGGCGGCG GATCTCTCGC AGGCGACATC GTACAGGGTC GAGGAGCGCA CGCTGCGGAT CGAAACCCGA GCGGGTGTCA CATATTCTTT TAGCGTCCAA GCAGAGTAA
|
Protein sequence | MILPRIACVV FIATTFAATT VSAQSMEAVP FTCNDGRSLV AEFGQDSVRV TMEVTLEAQP SGSGFVYSGT PGTLRGQGDE VRWQSTGTDP VICTAVPGGA ALVGGVWELV QVGEAEIEET GHHTIGFLAD GGLVLRADCN LGRGTWEAEP ETNSAGALSV GPVALTRMAC AADPVPQMAA DLSQATSYRV EERTLRIETR AGVTYSFSVQ AE
|
| |