Gene Dshi_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2283 
SymbolpamO 
ID5713937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2410872 
End bp2412536 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content60% 
IMG OID641268206 
Productphenylacetone monooxygenase 
Protein accessionYP_001533620 
Protein GI159044826 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACG AGACAAAGAC CCGGAAAAGA AACCCGCTGC CGACCGAGAT CGACGCGCTG 
GTCATCGGCA CCGGTGTCGC CGGATTGTAT CAACTGCACC AACTGCGTGA GCTTGGGCTG
AACGCGCACG CCTGTGATAC CGCAACCGAT GTGGGCGGCA CCTGGTACTG GAACCGCTAT
CCCGGCGCCA AATTCGACAG CGAGTCTTAT ATCTACCAGT ACCTGTTCGA CGAGCGCCTC
TACAAGGACT GGACCTGGAG CGAGCGCTTC CCCGGCCAGC GCGAGATCGA GAGGTGGCTG
CACTACGTGA CAGACCGGCT GGATCTGCGG CGCGATATCT CTTTCTCGAC CACCATCACC
AGCGCGCGCT TTGACGAGGT GCGCGGGCTC TGGACGGTCG AGACCGACCA AGGTGATGTC
GTGACGACAC GCTACCTGAT CGGGTGCACC GGCATGCTGT CGGCCCCCCT GACCGAGCGT
TTCCCGGGAC AGGCGAGCTT CAAGGGAAAG ATCGTCCATA CCGGGCGCTA TCCAAAGGAA
GGCCTTGCGC TGGAAGGCAA GCGCGTCGCC GTGATCGGAA CCGGCGCCAC CGGCATCCAG
GTGATCCAGA CCATCGCGCC CGAAGTGGCT CAGCTGACCG TGTTCGTGCG CACCCCGCAA
TATGTCCTGC CCATGAAAAA CCCCAAATAT GGCCCCAAAG AGGCCGCTTG GTACAAGGAC
CGCTTTGATG AGTTGAAGAC CACCATTCCC CATACCTTCA CCGGGTTCGA GTACGATTTC
GAGAACACAT GGGCTGATCT GACACCGGAG CGTCGCCGCG AGATCCTCGA GGAGATTTAC
GCCGATGGCT CGCTCAAGCT CTGGCTTGCT TCTTTTGTGG AGATGTTCTT CGACGAAGAG
GTCAGTGAAG AGATCTCCGA ATTCGTCCGC GAAAAGATGC GTGCGCGCCT CAAGGATCCG
CGCCTCATCG ACATTCTTGT CCCCAAGAAG GGGGATTACG GCTTCGGCAC CCACCGCGTG
CCATTGGAAA CTCAATACCT GGAGGCATAT CTGCGCGACA ACGTCGAAGC CGTCAGCGTA
CGCGACAACC CGATTGCCGA GATCGTGCCC GAGGGGGTGA AACTCGAAGA TGGCACTGTC
TACGAAGTCG ACACCATCAT CATGGCGGTG GGTTTCGATG CCGGGTCAGG CGCGCTGGCG
CGGATCGACA TCACCGGTCG GGGCGGAATG AAACTGGCCG AGGAATGGCG CAAGGACATC
CGCACCATGC TCGGGATGAT GAAACATGGC TTTCCGAACC TGTTCATGAC CGGCGCACCG
CTCGCGCCTT CTGCGGCGCT CTGCAACATG ACCACCTGCC TCCAGCAGCA GACCGAGTGG
ATCACCAACT GCATCCGCGA CATCCGTGCC AGCGGCAATG ACGTGATTGA ACCGACCAAG
GAGGGCGAAG ACGCCTGGGT GCAGCATCAC GACGAAACCG CCGAGGCCAC GCTGATCGCG
AAGACCGATT CCTGGTACAC CGGCTCCAAC GTGCCGGGCA AACCGCGGCG TGTGCTGTCC
TATACTGGCG GAGTTGGAGT TTATCGCGAC AAATGTGAGG CGATCGCCAA GGAGGGCTAT
CCCTCCTTCA AGATGAGCAA GGCCAAAACC ACGAAGGTGG CCTGA
 
Protein sequence
MLDETKTRKR NPLPTEIDAL VIGTGVAGLY QLHQLRELGL NAHACDTATD VGGTWYWNRY 
PGAKFDSESY IYQYLFDERL YKDWTWSERF PGQREIERWL HYVTDRLDLR RDISFSTTIT
SARFDEVRGL WTVETDQGDV VTTRYLIGCT GMLSAPLTER FPGQASFKGK IVHTGRYPKE
GLALEGKRVA VIGTGATGIQ VIQTIAPEVA QLTVFVRTPQ YVLPMKNPKY GPKEAAWYKD
RFDELKTTIP HTFTGFEYDF ENTWADLTPE RRREILEEIY ADGSLKLWLA SFVEMFFDEE
VSEEISEFVR EKMRARLKDP RLIDILVPKK GDYGFGTHRV PLETQYLEAY LRDNVEAVSV
RDNPIAEIVP EGVKLEDGTV YEVDTIIMAV GFDAGSGALA RIDITGRGGM KLAEEWRKDI
RTMLGMMKHG FPNLFMTGAP LAPSAALCNM TTCLQQQTEW ITNCIRDIRA SGNDVIEPTK
EGEDAWVQHH DETAEATLIA KTDSWYTGSN VPGKPRRVLS YTGGVGVYRD KCEAIAKEGY
PSFKMSKAKT TKVA