| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2282 |
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| Symbol | |
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| ID | 5713936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2409776 |
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| End bp | 2410660 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268205 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001533619 |
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| Protein GI | 159044825 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGAT TGATACCGTT TGAAGAATTG CCCGACCATG TACCGGGCAA GGTGCTTCTG
GCAAGCGATG GCCAGAACTG GAAAGACGTG GCGTTGCGGT CCTATCATTA CCATGGTCAG
GACGTTGTCG TACCTGCCAT GCGCGACTTC ATGCTGGTCA GCTACAAGTC CGGCACCACA
CCGATGCAGC GTCGCTTCGA GGGCAAGTGG CAGCGCGATA CGCTGGGGCC TGGCGCGACC
TCGCTGCTGA CCAGGGCCCA GCGCGCCTAC TGGAACTGGC ATGATCCGAT CGACGTGACC
CATGTCTACC TGTCGGGGGA TCTTGTGGCC GAGGTCGCGA GCGAACTTAT GGACTGTGCC
GTAACCGAGG TATCGCTGCA CGACGTGCTC CGGACGGATG ATCCGGTGAT GGCCAACGCC
GCAGAGGCGA TTGCGCGGGA GGCCCGCTCA CAGGCACTGG GCGGTGCGCT TTATGTCGAC
GCAGTGGCAC GGGGCCTAAT CATCCACCTG CTGCGAAGCT ATGCTTCCGT TCGCCTTTTG
GAGACCCGCA ACAACGACGA GCTCTCCTCG TGGCAGGAGC GGCGGATCGT AGACTTCATC
GAAGCGAACA TGGCGACATC GCTCGACCTC AAGGCTATGG CCGGGGCACT CGACATGACG
ACCTGCCTGT TTGCGCGGAA ATTCCGACGC AGCTTCGGCA GGCCGCCCTA CGCCTTCGTC
AAATCGAAAC GATTGGAGCG TGCTCGCCGT CTGCTTGCGA CCACCGGGTT GCCGATCAAG
GCGATCGCCG CCGATTGCGG TTTCTGCGAC CAGGCGCACC TGACGCGGAT GTTCTCCGCC
GAATTCGGAG AAACTCCGGC CGTTTTCCGT CGCAAGGCGC ATTGA
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| Protein sequence | MGGLIPFEEL PDHVPGKVLL ASDGQNWKDV ALRSYHYHGQ DVVVPAMRDF MLVSYKSGTT
PMQRRFEGKW QRDTLGPGAT SLLTRAQRAY WNWHDPIDVT HVYLSGDLVA EVASELMDCA
VTEVSLHDVL RTDDPVMANA AEAIAREARS QALGGALYVD AVARGLIIHL LRSYASVRLL
ETRNNDELSS WQERRIVDFI EANMATSLDL KAMAGALDMT TCLFARKFRR SFGRPPYAFV
KSKRLERARR LLATTGLPIK AIAADCGFCD QAHLTRMFSA EFGETPAVFR RKAH
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