| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2281 |
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| Symbol | |
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| ID | 5713935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2408517 |
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| End bp | 2409482 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641268204 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_001533618 |
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| Protein GI | 159044824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA CAATCATCTC TATCGGTCTT GCCGCTGGGC TCTGGGGGGT GGGACCTCCG
GTTTCCGCTG CCGCAGCCGA CCGACAAGTT CTTTGCGTGC TCGTGCCCCA TTTCAAGGAC
GAGTATTGGC TGAGTGTCGG GTTCGGGTTG GAGGAAGAAG CCAGGAAACA GAACGTCGAG
TTGTTGTTCT TCGAGGCCGG AGGCTATCGT GCCAGGGCGA CACAGATCGC ACAGCTGGAA
CGATGTGCGG CTTTAGGGGT CGATGCCATC CTGATCGGGG CAGTCAGCTC GGACCATCCT
GACCTCACCG AAACACTTGC CCAAGTGTCG GCGGACACCC CCGTCTTCGG GCTGATCAAC
GAAATTCGCA GCGATGCATT GAGCGCCCGG ATCGGCGTGG ACTGGACGGA AATGGGGCAT
ATCCTGGGAA CGTTCCTGCG CGACCGCCAT CCCTCCGGTT CAGAACCGAA AACTGCGGTC
CTTCTGACCG GCCCCGCCGA ATCCGGGTGG ACAGGGCCGC TTGAAGCAGG TCTGCGGGAC
GGGTTGGCCG GAAGCACGGT CACGATCCTC GACATCTACA GAGCGGATAC CGGGCTGAGG
CAGCAACTGC GCCTTGCAGA AGAGGCATTG GAGCATCACC CCAAGGTCGA CTACCTGATC
GGCAGCGCTC CGGCTATCGA GGCGGCGATC GGTCTCTTCG CCTCCCATGC GGCGCCTGAC
CGACCGCAAA TGCTGGCGAC CTATGTCAGC CACACGATCA AGCGCAGCCT TATGAATGGC
AATGTCCTGG CAGCATCTTT CGACGACCCG ATGTTTCAGG CCCGTCTGGC GATGCTTGCA
GCTGTATCGG AAGCGCCCGG TCAAGCACGA GTGGTGGGTC CGGAGGTGCG GTTGCTGAGG
GCCGGGGACG AAACGCTAGG ACAGATACCG ACCTCGCCCG CAAAGTACTT TCCGACACTT
CAATAG
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| Protein sequence | MLRTIISIGL AAGLWGVGPP VSAAAADRQV LCVLVPHFKD EYWLSVGFGL EEEARKQNVE
LLFFEAGGYR ARATQIAQLE RCAALGVDAI LIGAVSSDHP DLTETLAQVS ADTPVFGLIN
EIRSDALSAR IGVDWTEMGH ILGTFLRDRH PSGSEPKTAV LLTGPAESGW TGPLEAGLRD
GLAGSTVTIL DIYRADTGLR QQLRLAEEAL EHHPKVDYLI GSAPAIEAAI GLFASHAAPD
RPQMLATYVS HTIKRSLMNG NVLAASFDDP MFQARLAMLA AVSEAPGQAR VVGPEVRLLR
AGDETLGQIP TSPAKYFPTL Q
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